Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1210 138 7e-28 seq1971 131 1e-25 seq426 129 4e-25 seq396 125 5e-24 seq374 118 7e-22 seq1077 91.5 1e-13 >seq1210 Length=15033 Score = 138 bits (152), Expect = 7e-28 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| |||||||| || |||| | || Sbjct 12708 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 12767 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 12768 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 12827 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || |||| || |||| ||| |||||| Sbjct 12828 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGATCCCTCAACCTCAAGGGTGATGGTC 12887 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG--ATAGTGGA 34986 || || ||||| |||||||||||||| |||||| ||| |||| Sbjct 12888 TTGCCTGTGAGAGTCTTTACAAAGATTTGCATGCTATAATGGA 12930 >seq1971 Length=9940 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 4582 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 4523 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 4522 TCAAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4463 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||| || || | ||| |||||| Sbjct 4462 TGGATCTTGGTCTTGACGTTCTCGATGGTGTCCGAGCCCTCAACCTCGAGGGTGATGGTC 4403 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 4402 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4371 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| || ||||| ||| |||| | || Sbjct 4354 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGGCCGTCC 4295 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||| || || || || ||||| | || | || |||||||| Sbjct 4294 TCAAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCGGGGGGGATGCCTTCCTTGTCC 4235 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||||||| || | ||| |||||| Sbjct 4234 TGGATCTTGGTCTTGACGTTCTCGATGGTGTCCGAGCCCTCGACCTCGAGGGTGATGGTC 4175 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 4174 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4143 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||||||| ||||| |||||||| ||| |||| |||| Sbjct 4810 AGGACGAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 4751 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || || || ||||| | || | ||||||||||| Sbjct 4750 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 4691 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | | ||||| || | ||| |||||| Sbjct 4690 TGGATCTTGGTCTTGACGTTCTCAATGGTGTCGGAGCCTTCGACCTCGAGGGTGATGGTC 4631 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||| ||||| Sbjct 4630 TTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 4599 Score = 107 bits (118), Expect = 1e-18 Identities = 154/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 4126 AGGACGAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 4067 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||| || || || || ||||| | || | ||||||||||| Sbjct 4066 TCAAGCTGCTTTCCAGCGAAAATGAGACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 4007 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| ||| ||||| || |||| || |||| ||| | Sbjct 4006 TGGATCTTGGTCTTGACGTTCTCAATGGTATCGGATC-----CCTCCACCTCAAGGGTGA 3952 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || |||||||| || || || ||||| Sbjct 3951 TGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3915 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| ||||| || || |||| | || Sbjct 5038 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 4979 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || || || ||||| | || | ||||||||||| Sbjct 4978 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 4919 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||| || || | || |||||| Sbjct 4918 TGGATCTTGGTCTTGACGTTCTCGATGGTGTCGGAGCCCTCAACCTCGAGAGTGATGGTC 4859 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || || |||||||| Sbjct 4858 TTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 4827 >seq426 Length=101737 Score = 129 bits (142), Expect = 4e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||||||||| || || || || ||| |||| |||| Sbjct 75 AGGACGAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCC 134 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || ||||| || || || |||||||| | || | ||||||||||| Sbjct 135 TCGAGTTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC- 193 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || ||||| | | || | ||| |||| || |||| ||| ||||| Sbjct 194 TTGAATCTTAGTCTTGACATTTTCGATAGTATCAGAACCCTCAACCTCAAGGGTGATGGT 253 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || |||||||||||||| ||||| Sbjct 254 CTTGCCAGTTAGAGTCTTTACAAAGATTTGCAT 286 >seq396 Length=82706 Score = 125 bits (138), Expect = 5e-24 Identities = 162/217 (75%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| || || || || || ||| |||| |||| Sbjct 75 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGAAAGGGTGCGGCCATCC 134 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 135 TCAAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC- 193 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGAT-TCATTGG---CCTCGACATCAACGGTTA 34940 || | | || || ||||| || | ||||| || || |||| || || | ||| | Sbjct 194 TTGAATCTTAGTCTTGAC--AT--TTTCGATAGTATCGGAACCCTCAACCTCTAGGGTGA 249 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || ||||||||||||||||| ||||| Sbjct 250 TGGTCTTGCCAGTTAGGGTCTTTACAAAGATTTGCAT 286 >seq374 Length=102525 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| || || || ||||| ||| |||| | || Sbjct 404 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAGAGGGTGCGGCCGTCC 345 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| ||||| || || || |||||||| | || | ||||||||||| Sbjct 344 TCAAGTTGCTTTCCAGCGAAAATTAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 285 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | | ||||| || | || |||||| Sbjct 284 TGGATCTTAGTCTTTACGTTCTCAATGGTATCCGAGCCTTCGACTTCGAGAGTGATGGTC 225 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| |||||||| |||||| Sbjct 224 TTGCCAGTGAGGGTCTTGACAAAGATTTGCATG 192 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||||||||| || || || || |||| | || Sbjct 860 AGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCGGAAAGAGTGCGGCCGTCC 801 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || || || || | || | ||||||||||| Sbjct 800 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGATCGGGGGGAATGCCCTCCTTGTC- 742 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || |||||| | || | || | |||| || || | || || || Sbjct 741 TTGAATCTTAGTCTTGACGTTCTCAATGGTGTCCGAGCCCTCAACCTCCAGAGTGATAGT 682 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| |||||||||||||| || || ||||| Sbjct 681 CTTTCCAGTGAGGGTCTTTACGAAAATTTGCAT 649 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| || || || || |||| | || Sbjct 632 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCC 573 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || || ||||| | || | ||||||||||| Sbjct 572 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 513 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | || | |||| || || | || |||||| Sbjct 512 TGGATCTTTGTCTTGACGTTCTCAATGGTATCGGAGCCCTCAACCTCCAAAGTAATGGTC 453 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| |||||||| || || ||||| Sbjct 452 TTGCCAGTGAGAGTCTTTACGAAAATTTGCAT 421 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||||||||||||||| || || |||| |||| Sbjct 176 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGGCCATCC 117 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| || ||||| || || || |||||||| | || | ||||||||||| Sbjct 116 TCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 58 >seq1077 Length=16265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 5430 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 5371 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || || ||||| | || | ||||||||||| Sbjct 5370 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 5311 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||| || || | ||| |||||| Sbjct 5310 TGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGAGCCCTCAACCTCGAGGGTGATGGTC 5251 Query 34946 TTTCC 34950 || || Sbjct 5250 TTACC 5246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325651808202413