Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_022915.1 Length=40471 Score E Sequences producing significant alignments: (Bits) Value seq3424 84.2 6e-12 >seq3424 Length=1664 Score = 84.2 bits (92), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 36732 TGGCCCGCGCTAGGAACATCAAGCCAAGCTTCTTCACGAACGACGTGCTCGCCGAGATC- 36790 ||||||||||||| || ||||| ||| | ||||| | |||| ||| |||||| ||||| Sbjct 1470 TGGCCCGCGCTAGAAATATCAAACCAGGATTCTTTAAGAACTACGAGCTCGC--AGATCA 1527 Query 36791 GCGCCGCTA-GGCCGCCTTCTGTTTCAGGGCTTGTGGTGCGTTGCTGACCGCGAGGGGCG 36849 ||| || | || |||||||| |||||||||||| | ||||| || || || || Sbjct 1528 AGGCCCATACGCCCAAATTCTGTTTGCCGGCTTGTGGTGCCTCGCTGATCGTGAAGGCCG 1587 Query 36850 CCTTGAAGACCGGCCGAAGAAGATCAAGGTCGAACTTCTTCCTTATGACGAATGTGACGT 36909 | | ||||| ||| ||| |||| || || ||||||| |||| || || || Sbjct 1588 CTTAGAAGATAAGCCACGTCTGATTAAGGCTGAGCTATTTCCTTACTACGAGTGCGATGT 1647 Query 36910 GAAC 36913 ||| Sbjct 1648 TAAC 1651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129369733039542