Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq426 143 2e-29 seq396 134 1e-26 seq374 87.8 1e-12 >seq426 Length=101737 Score = 143 bits (158), Expect = 2e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | || || ||||| || || ||||| || ||||| | | Sbjct 60 CCTCCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 119 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| |||||||| |||||||| | || | | ||||| || || ||| Sbjct 120 AGGGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCAGGAGGA 179 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| || || |||||| |||| | ||| |||||| || || Sbjct 180 ATACCCTCCTTGTCTTG-AATCTTAGTCTTGACATTTTCGATAGTATCAGAACCCTCAAC 238 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791 ||||| || || || |||||||||| || || ||||| || |||||| ||| Sbjct 239 CTCAAGGGTGATGGTCTTGCCAGTTAGAGTCTTTACAAAGATTTGCATTGTAA 291 >seq396 Length=82706 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | || || ||||| || || || || || ||||| | | Sbjct 60 CCTCCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGAA 119 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || ||||| |||||||| | |||| | ||||| || || ||| Sbjct 120 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGA 179 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| || || |||||| |||| | ||| || ||| || || Sbjct 180 ATACCCTCCTTGTCTTG-AATCTTAGTCTTGACATTTTCGATAGTATCGGAACCCTCAAC 238 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791 || || || || || |||||||||| ||| || ||||| || |||||| ||| Sbjct 239 CTCTAGGGTGATGGTCTTGCCAGTTAGGGTCTTTACAAAGATTTGCATTGTAA 291 >seq374 Length=102525 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | ||| || ||||| || || ||||||||||| || | | Sbjct 191 CCTCCACGAAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAA 132 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| |||||||| |||||||| | || | | ||||| || || ||| Sbjct 131 AGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGGGGA 72 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || || || || || || | || | |||||| || ||| || Sbjct 71 ATGCCCTCCTTGTCCTG-GATCTTAGTCTTTACGTTCTCAATAGTGTCGGAGCCTTCGAC 13 Query 29739 TTCAAGAGTTAT 29750 ||| || || || Sbjct 12 TTCCAGGGTAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385170716191107