Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq5202 95.1 2e-14 seq90 87.8 3e-12 seq56 86.0 1e-11 seq77 84.2 4e-11 >seq5202 Length=749 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 179 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 238 Query 165254 GCTAGACCAGCCAAA 165268 | ||| ||||||| Sbjct 239 GTCAGAGGAGCCAAA 253 >seq90 Length=95466 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45014 GGCACACTGGGTAGCGGTAACCACTTCGTTGAAATCTGTTTAGACGAAGAGCAACGCGTT 45073 ||||| |||| | ||| ||||||||||| || ||||| | || ||||| || ||||| Sbjct 11839 GGCACGTTGGGCACCGGCAACCACTTCGTGGAGATCTGCCTGGATGAAGACCAGCGCGTG 11898 Query 45074 TGGGTAATGCTTCATTCAGGTTCACGTGGTATCGGCAACACCATCGGTAAATACTTCATC 45133 ||| | ||||| || || || || || || | ||||| ||||||| | ||||||||| Sbjct 11899 TGGTTCATGCTGCACTCCGGCTCGCGCGGCGTGGGCAATGCCATCGGCACCTACTTCATC 11958 Query 45134 GAGAAAGCCAA 45144 ||| ||||| Sbjct 11959 GAGCTGGCCAA 11969 >seq56 Length=468132 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 165197 ATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCAGCT 165256 |||| |||||||||||| | ||||||||||||||| ||||||||||||||| |||||| Sbjct 230679 ATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAGCCCAGCT 230738 Query 165257 AGACCAGCCAAACAATG 165273 | ||||||| |||| Sbjct 230739 CGGGGAGCCAAAGAATG 230755 >seq77 Length=324652 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 165197 ATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCAGCT 165256 |||| |||||||||||| | ||||||||||||||| ||||||||||||||| |||||| Sbjct 157508 ATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAGCCCAGCT 157449 Query 165257 AGACCAGCCAAACAAT 165272 | ||||||| ||| Sbjct 157448 CGGGGAGCCAAAGAAT 157433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867228837144480