Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq56 102 9e-17 seq351 89.7 6e-13 seq2123 84.2 2e-11 >seq56 Length=468132 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 72103 TTGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACC 72162 ||||||||||| || ||| ||||||| |||| ||||||||||| |||||||||||||| Sbjct 224495 TTGGTGCCGGTGAAAGGAATCGAACCCTCGACCTTCTCATTACAAGTGAGCTGCTCTACC 224436 Query 72163 AACTGAGCTAAACCGGCTTGG 72183 |||||||||| |||||| ||| Sbjct 224435 AACTGAGCTACACCGGCGTGG 224415 >seq351 Length=183164 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 74609 TGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCTAACC 74668 ||||| ||||| ||||||||||||| | ||| || ||||||||||| | |||||||||| Sbjct 124281 TGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAACC 124340 Query 74669 AATTGAGCTATAGGGCC 74685 || ||||||||||| || Sbjct 124341 AACTGAGCTATAGGCCC 124357 >seq2123 Length=17304 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 |||||||| || |||| |||||||| ||||| ||||||| ||||| |||||||||| Sbjct 12520 TGGTGCCGCTTCCCGGAATCGAACCGAGGACCCCATCATTACGAATGATGTGCTCTACCA 12579 Query 72164 ACTGAGCTAAACCGGC 72179 ||||||||||| |||| Sbjct 12580 ACTGAGCTAAAGCGGC 12595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554283639673120