Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq613 116 5e-21 seq105 102 1e-16 >seq613 Length=108671 Score = 116 bits (128), Expect = 5e-21 Identities = 227/325 (70%), Gaps = 13/325 (4%) Strand=Plus/Minus Query 99860 CCAAAACCACCTGCGCCGCGTTCAGTTTCCGTACTGAACTCATCCACCTGTTTGAACAGA 99919 || || |||||||||||||||| ||||| || |||||| || ||| | | ||| | Sbjct 59986 CCGAAGCCACCTGCGCCGCGTTGTGTTTC-GTC--GAACTCTTCGACCAGCTCGAAGTGC 59930 Query 99920 CCCATCACCACCGGTTGAATCAGGTATTGCGCAATACGGTCGCC-ACGAGAGATTTTAAA 99978 || |||||||||| | || | ||| ||||| || ||||| ||| | ||| || || Sbjct 59929 GCCTGCACCACCGGTACCAGCACGAGTTGGGCAATGCGCTCGCCGACG-GCGATATTGAA 59871 Query 99979 CGCAGGTCCCTGAGTGTTACGGTTCCA-CAGTGAAACCATCAGCTGCCCGTTGTAGTCTG 100037 ||| |||| || | ||||||||| ||| || ||||||| || || | |||||| | Sbjct 59870 CGC-GGTC--TG---GCCACGGTTCCAGCAG-GACACCATCAACTCGCCCTGGTAGTCCG 59818 Query 100038 CATCAATGACGCCCGTCAGGTTACCCAGTACGATACCGTGTTTGTGACCCAGACCGGAGC 100097 || || | ||| |||||| || || ||||| ||||||||||| ||||| ||||||| Sbjct 59817 AGTCGATCAGCCCCACCAGGTTGCCGAGGACGATGCCGTGTTTGTGGCCCAGGCCGGAGC 59758 Query 100098 GAGGGTGAATCAATCCCACGTAGTTTGGATTCTTCAGGAAGAATGCCAGACCGGTTGGAA 100157 | || | |||| || | | || | || | ||| | ||| ||||| |||| Sbjct 59757 GCGGCAGGATCAGCGCCGCCAGGCCCGGGTCGCCCACGTAGATCGACAGGCCGGTCGGAA 59698 Query 100158 TCAGTTTTGTTTCGCCAGGTTCGAG 100182 |||| | || | ||| ||||| || Sbjct 59697 TCAGAATGGTCTGGCCTGGTTCAAG 59673 >seq105 Length=265611 Score = 102 bits (112), Expect = 1e-16 Identities = 204/297 (69%), Gaps = 14/297 (5%) Strand=Plus/Plus Query 87493 CCCAGACGTGTCAGGAACATTTTCATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGG 87552 ||||| || |||||||||||||||||||| || ||| |||||| |||||||||||| Sbjct 7976 CCCAGCCGGGTCAGGAACATTTTCATCTGCTCCACGGTGGTGTTCTGCGCTTCGTCCAGG 8035 Query 87553 ATAACTACCGCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTC---C 87609 || || ||| | | | ||||||||| |||||||| || | || || ||||| Sbjct 8036 ATTACATACGCATCGTTGAGCGTGCGGCCGCGCATATAGGCCAGCGGCGCGATTTCGATG 8095 Query 87610 ACCTTCTTCACATCCGGGCGCAAGCAGTACTGAAGGAACGTACCACCAAGGCGTTTC-TC 87668 || ||||| ||| | || ||| ||| ||| ||| || |||| | Sbjct 8096 ACATTCTT---TTCCAGCAGC-TTCAGCACTTTCTCCACG-CCCA-----GCATTTCATA 8145 Query 87669 CAGGATGTCTTGAACCGGGCGGAAATACGGGGCGAATTTCTCGCTGATGTCCCCAGGCAA 87728 ||| ||| | | |||||| | ||||||| ||| ||||| ||||| || || |||| Sbjct 8146 CAGCGCGTCGTACAGCGGGCGCAGATACGGGTCGACTTTCTGGCTGAGATCGCCCGGCAG 8205 Query 87729 GAAGCCCAGGTTCTCACCGGACTCTAAGACAGGACGCGTCACGATGATGCGCTCCAC 87785 ||| ||||| ||||| |||| ||| | | || ||| || ||| | |||| ||| Sbjct 8206 GAAACCCAGCTTCTCGCCGGCCTCCACCGCCGGTCGCACCAGGATCAGCCGCTGCAC 8262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698466625049080