Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq3870 132 7e-26 >seq3870 Length=345 Score = 132 bits (146), Expect = 7e-26 Identities = 215/304 (71%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 28252 ACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACGTTTCGCAGCGCATTCC 28311 |||| || | || ||| ||| |||| || ||||||||||| || || ||||| ||| Sbjct 328 ACTTTCACTACCTGATCGTAGTTCAGGATATCCGGATACATGCGCTTGCTTGCGCACTCC 269 Query 28312 AGAGCCAACTGTTTGATACGATACAGCGGATCAGTCGGGTTCAAG-TTGTGTCCGTCTTT 28370 || |||| ||||||||| || |||||| | | || | | || | || || Sbjct 268 AGCGCCAGCTGTTTGATGTCGTAGTTCGGATC-GCCTTTTTTATGGTTCAGACCATCGCG 210 Query 28371 CAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTTACCAAGACCAGCCAA 28430 | || || |||||||||||||| || | || ||| | |||||| || || || | Sbjct 209 AATCGCAAACACCAGTTTCGGGAACACCGCAGTTTTACGGTTTTTACCGAGGCCTGCGAT 150 Query 28431 ACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTCCCAGCTAGTACCAAGACCAAA 28490 ||| |||||| | ||| |||||||| || |||||||| || || |||||||| Sbjct 149 ACGGTTACGCAGGATCGATTCCTGAATCAGGCGCGATTCCCAGCTGGTGCCCAGACCAAA 90 Query 28491 GCCGAAGG-TACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGTGTTGACCTCATACT 28549 || |||| |||| ||||| || ||||| || |||| |||||| ||||| || || |||| Sbjct 89 ACCAAAGGTTACA-AACGGCGTCTGACCGTTGGCGGTGTGCAGGGTGTTTACTTCGTACT 31 Query 28550 CCAG 28553 |||| Sbjct 30 CCAG 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710199510284720