Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023737.1 Length=155586 Score E Sequences producing significant alignments: (Bits) Value seq3559 98.7 1e-15 seq340 93.3 4e-14 seq9125 87.8 2e-12 seq29 87.8 2e-12 seq3096 84.2 2e-11 seq375 84.2 2e-11 >seq3559 Length=12351 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 115022 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 115081 || |||||||||||||| | | || ||| ||||| | |||| ||| |||||| Sbjct 3516 GGGCCGGGCCGTGGCTCGGGTGCCGGGTCGATGGTCGCGTACGCGATGAAGATCACCGAC 3575 Query 115082 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 115141 ||||||| || | ||| |||||| |||||||||||| ||||||| ||||| | | Sbjct 3576 CTCGACCCACTCGAACACGGCCTGATCTTCGAGCGCTTCCTCAACCCCGACCGTGTCTCC 3635 Query 115142 TTCCCCGACATCGACGTCGACTTC 115165 | |||||| |||||||||||||| Sbjct 3636 ATGCCCGACTTCGACGTCGACTTC 3659 >seq340 Length=55687 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 115021 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 115080 |||||| |||||||| |||| | ||||||||||| ||| | || |||||| Sbjct 6316 CGGCCCCGGCCGTGGTTCCGGTGCCGGCTCGCTGGTGGCCTGGGCGCTGCAGATCACCGA 6375 Query 115081 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCC 115138 ||||||||||| |||| ||||| |||||||||| ||| ||||||| || ||| | Sbjct 6376 TCTCGACCCGATCCCGTACAACCTGCTGTTCGAGCGGTTCCTCAACCCCGAACGCGTGTC 6435 Query 115139 GACTTCCCCGACATCGACGTCGACTTC 115165 || | |||||| ||||| |||||||| Sbjct 6436 GA--TGCCCGACTTCGACATCGACTTC 6460 >seq9125 Length=594 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/280 (68%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 152240 CGGCCTGCTGCAGCGCAAGAGCTTGATCGAGGACCCGCAGATTCTCATCGCGGCCACCGG 152299 ||| |||||||| |||||| | | || || ||||||||||| ||| | | ||| Sbjct 29 CGGGCTGCTGCAACGCAAGGGATACGCGGATGATCCGCAGATTCTGTTCGGTGGTATCGG 88 Query 152300 TGATGCCAACAGCGACCGGGTGCCGCTGCAGGTCGGCCAGTTCGAGTCCGACAACCGCAT 152359 || ||| | ||| | |||||| || || ||||||||||||||||| | ||| || Sbjct 89 CGACGCCGATTCCGATCAGGTGCCACTACAAGTCGGCCAGTTCGAGTCGGGTAACGCGAT 148 Query 152360 CGACG-CCATGATCGAGGCCATGTACCTCGAAGGCTTCGGGGGCGGGCAGGCACACGAGA 152418 |||| || ||| | |||| | |||||| ||| ||| || || ||| || | Sbjct 149 GGACGAGCAGCTTCG-GACCATCTTCCTCGAGGGCAACGGTGGTGGACAGAAGTCGGAAA 207 Query 152419 CCTACGAGCTCGCGGCCTACTTCCTGGCCCGGCACACC--TACCTGGAGCCGTGGCACAA 152476 ||| || | || || || ||| |||| || |||||| ||| ||| | ||| | || Sbjct 208 GCTATGAATTGGCAGCATATTTCATGGCGCGCCACACCAGTAC--GGATGCCTGGGAGAA 265 Query 152477 GCAGGGGCGCAAGGGCTATGCCATCTTCATCGGTGACGAG 152516 || || | || ||||| | || ||||||| |||||| Sbjct 266 GCGCGGAAGGAAAGGCTACCTCTTCATCATCGGCGACGAG 305 >seq29 Length=97445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 91911 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGA 91970 ||||||||||| ||||| ||| |||||||| ||| ||||| || ||||||||||||| Sbjct 16047 ACGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGA 16106 Query 91971 ATCCTGTCACCCCGAC 91986 |||||||| ||||||| Sbjct 16107 ATCCTGTCTCCCCGAC 16122 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 91912 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 91971 |||||||||| ||||| ||| |||||||| ||| ||||| || |||||||||||||| Sbjct 15833 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 15892 Query 91972 TCCTGTCACCCCGAC 91986 ||||||| ||||||| Sbjct 15893 TCCTGTCTCCCCGAC 15907 >seq3096 Length=9392 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 91911 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGA 91970 ||||||||| | ||| |||| || |||||| ||| ||||| ||| ||||||||||| | Sbjct 5388 ACGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAA 5329 Query 91971 ATCCTGTCACCCCGAC 91986 |||||||||||||||| Sbjct 5328 ATCCTGTCACCCCGAC 5313 >seq375 Length=82088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 115022 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 115081 ||||| ||||| || |||| || || |||||||| | |||| ||||||| ||| Sbjct 20604 GGCCCCGGCCGGGGTTCCGGCGCCGGTTCGCTGGTGGCGTACGCGCTGGGCATTACCGAC 20545 Query 115082 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 115141 | ||||||||| |||||| || |||||||||||||| | || || || || | | Sbjct 20544 CTGGACCCGATCCGCTACGACTTGCTGTTCGAGCGCTTCCTGAATCCCGAGCGGGTCTCC 20485 Query 115142 TTCCCCGACATCGACGTCGACTTC 115165 | |||||| |||| |||||||| Sbjct 20484 ATGCCCGACTTCGATATCGACTTC 20461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497682947058320