Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq8755 194 1e-44 seq5676 152 3e-32 seq355 118 7e-22 seq8759 114 9e-21 seq64 107 1e-18 seq1369 96.9 2e-15 seq59 95.1 8e-15 seq4407 93.3 3e-14 >seq8755 Length=560 Score = 194 bits (214), Expect = 1e-44 Identities = 205/270 (76%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 94425 GATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCACCGG 94484 ||| ||| | |||| || |||||||||||| || ||| | | | | ||| |||| || Sbjct 284 GATTTCCTCGTCGGTGATGAACGCGCCCTGCATACGGGTCGGCTTACCCGCGCCCATGGG 225 Query 94485 CAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCAC 94544 |||||| | ||||||||||| || ||||||| |||||| ||| || || ||||| || Sbjct 224 CAGGAACAGGCCGTCACCCATACCGATGAGCTTCTCGGCGCCGGGCTGATCGAGGATGAC 165 Query 94545 CCGGCTATCGGTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGAT 94604 || || || || || | || ||||||| ||| ||||| ||||||||| ||||||| Sbjct 164 TCGCGAGTCCGTCAGTGAAGACGTCGCGAACGCCAGACGCGAAGGCACGTTGGTCTTGAT 105 Query 94605 GAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGC 94664 ||||| || || || || ||||| || |||||||| ||||| || || || || ||||| Sbjct 104 CAGGCCGGTGACGACGTCGACGGACGGGCGCTGCGTTGCCAGCACCAGGTGGATACCGGC 45 Query 94665 CGCACGCGCCTTCTGCGCGATGCGGACAAT 94694 ||||| || ||||||| ||||||||| || Sbjct 44 AGCACGGGCTTTCTGCGTGATGCGGACGAT 15 >seq5676 Length=789 Score = 152 bits (168), Expect = 3e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 94897 AGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAG 94955 ||||| |||||||| | |||||| ||||||||||| ||| ||||||||||| | ||| | Sbjct 70 AGGTGCGGGATACCTTCGTACGGCGTGAGCTCGAC-CATCTTGGGGTCGATGAGGATCAT 128 Query 94956 TTTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCT 95015 || || || || || ||| ||||| ||| || ||||| ||||| | |||||| Sbjct 129 CCGTACTTCTTCCGGCGTTGCTCGGGTGAGCAACGAGACGAGCATCGAGTTCACGAAGCT 188 Query 95016 GGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAG 95075 ||||| || || ||||| | || |||||||| |||||||||||||| || |||||| Sbjct 189 CGACTTACCGGAGCCGGTGGAACCTGCCACCAGGAGATGCGGCATCTTCGCGAGGTTCGC 248 Query 95076 GGAGACGTCCTTACCCTCGACGTCCTTGCCCACTGCCACGGTCAACGGATG 95126 | |||| || || |||||||||||||||| | | |||| |||||| Sbjct 249 GATGACGATGTTGCCGCCGACGTCCTTGCCCACGCCGATCGTCATCGGATG 299 >seq355 Length=98473 Score = 118 bits (130), Expect = 7e-22 Identities = 234/338 (69%), Gaps = 19/338 (6%) Strand=Plus/Minus Query 94435 TCGGAGACGAACGCGCCCTGTATCCGGAT-GGCG--CTGCGCGCCCCCACCGGCAGGAAT 94491 ||||||||||||||||| || | ||||| ||| ||| | ||| ||||| | | Sbjct 86500 TCGGAGACGAACGCGCCGTGAACACGGATCGGCAAACTG---GTGCCCGGCGGCATGTAG 86444 Query 94492 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 94551 | | |||||| |||| || |||||||| ||||||| ||| | ||| |||| | Sbjct 86443 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTCCGGGAA 86384 Query 94552 TCGGTGAGG---GACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGG 94608 ||| | | ||| | ||| |||| || || | || | |||| |||||| ||| Sbjct 86383 TCGATCTTGCTCGACACC-TGG--AACGCCATGCGGGTCGGGATGTTGGCCTTGATCAGG 86327 Query 94609 CCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCA 94668 || || | ||| ||||| || || ||||| ||||| |||| | || || ||||| || Sbjct 86326 CCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAGGATCAAGTGGATCCCGGCGGCC 86267 Query 94669 CGCGCCTTCTGCGCGATGCGGACAAT--GTTGGCCTCAACCTCTTTCTTGTAGCCACCCA 94726 ||||||||||| ||||| ||| | || ||| | || ||| |||||| | | || Sbjct 86266 CGCGCCTTCTGGGCGATACGGGCGATCAGTT--CTTCGACC---TTCTTGCCGACGATCA 86212 Query 94727 TCATGAGGTCCGCGAGTTCATCCACCACTACCACGATG 94764 |||| | ||| || | ||| || ||||| ||||||||| Sbjct 86211 TCATCATGTCGGCAAATTCGTCGACCACCACCACGATG 86174 >seq8759 Length=471 Score = 114 bits (126), Expect = 9e-21 Identities = 148/202 (73%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 94569 GGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGA 94628 |||||| | ||| || || || ||||| ||||||||| || || || || || ||| Sbjct 14 GGCGAAGGCCAGTCGAGACGGGACGTTCGCCTTGATGAGTCCGGTGACGACGTCGACGCT 73 Query 94629 GGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCG 94688 |||||||| ||||| |||||||| || ||||||| || ||||| ||||| |||||| Sbjct 74 CGGCCGCTGGGTCGCGAGGACGAGGTGGATGCCGGAGGCTCGCGCGAGCTGCGTGATGCG 133 Query 94689 GACAATGTTGGCCTCAACCTCTTTCTTGTAGCCACCCATCATGAGGTCCGCGAGTTCATC 94748 || || | |||| || || | | || ||| ||||||||||| ||||| || || Sbjct 134 CACGATCGAGTCCTCCACGTCG--CGAGGGGCGACC-ATCATGAGGTCGGCGAGCTCGTC 190 Query 94749 CACCACTACCACGATGTAGGGG 94770 ||||| |||| || ||| ||| Sbjct 191 GACCACGACCAGGAGGTACGGG 212 >seq64 Length=260832 Score = 107 bits (118), Expect = 1e-18 Identities = 137/184 (74%), Gaps = 11/184 (6%) Strand=Plus/Plus Query 94593 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 94652 |||| |||||| ||||| || | ||| |||||| ||| || ||||||||||||| | Sbjct 1269 GTTGGCCTTGATCAGGCCGGTGATCACGTCCACGCTGGGGCGTTGCGTCGCCAGGATCAA 1328 Query 94653 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAAT--GTTGGCCTCAACCTCT 94710 ||| ||||||||||||||||||||||| || | |||| | || ||| | || | | Sbjct 1329 ATGGATGCCGGCCGCACGCGCCTTCTGGGCCAGGCGGGCGATCAGTT--CTTCGATC--- 1383 Query 94711 TTCTTGTAGCCAC--CCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTAGG 94768 |||||| |||| ||||||| ||||| || || || || | || ||||||||| || Sbjct 1384 TTCTTG--CCCACCACCATCATCAGGTCGGCCAGCTCGTCGATGACCACCACGATGGTGG 1441 Query 94769 GGAG 94772 | || Sbjct 1442 GCAG 1445 Score = 98.7 bits (108), Expect = 7e-16 Identities = 117/156 (75%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 94968 AGGGGTCGCCCG-GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCG 95026 ||| |||| || |||||||||||| | | ||| | |||||| | ||||||||||| Sbjct 1727 AGGCGTCGGCCTTGTAGAGCAGCGACAGGATCATGGCGTTGATCCCGACGGACTTGCCCG 1786 Query 95027 ATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGGGAGACGTCC- 95085 | ||||||| ||| ||||||||||| || |||||||||||||||| || || || Sbjct 1787 AGCCGGTCGTGCCCGCCACCAGCAGGTGGGGCATCTTGGCCAGGT---CGGCCACCACCG 1843 Query 95086 --TTACCCTCGACGTCCTTGCCCACTGCCACGGTCA 95119 || || | | ||||||||||| |||| ||||| Sbjct 1844 GGTTGCCGGCAATGTCCTTGCCCAGCGCCATGGTCA 1879 >seq1369 Length=6225 Score = 96.9 bits (106), Expect = 2e-15 Identities = 203/294 (69%), Gaps = 13/294 (4%) Strand=Plus/Minus Query 94791 GCGCACGCC-AGCCTCCTG-CATCTGCCGGTATCGGTCGTCCATCTC---TACGGTGAGC 94845 ||||||||| ||| | || ||||| |||||| ||||| ||||| || ||| | | Sbjct 5797 GCGCACGCCCAGCTT--TGACATCTTCCGGTAACGGTCTTCCATTTCGCGTACCGC---C 5743 Query 94846 CACCGCAGCGTTTTCACCGCCTCGTCAGCCTCTGTAACCACGGGCTGGAGAAGGTGGGGG 94905 ||| ||||| | ||||||| | | || || || || || || ||||| || Sbjct 5742 CACTTCAGCGCCATGACCGCCTTTTTCGGGTCGGTCACAACAGGGGTAAGCAGGTGCGGA 5683 Query 94906 ATACCGTTGTACGGGGTGAGCTCGACACATTTGGGGTCGATCATGATGAGTTTGACCCGA 94965 ||||||| || | || || | ||||||||||| |||||| || | | Sbjct 5682 ATACCGTCATAGATCGACAGTTCTAGCATTTTGGGGTCGACCATGATCAGGCGGCACTCT 5623 Query 94966 TCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGAT-GAAGCTGGACTTGCC 95024 || || ||| |||||| ||||| || | | ||| | |||||| | | | | ||||||| Sbjct 5622 TCCGGCGTCAGCCGGTAAAGCAGTGACAGGATCATGGTGTTGATCGCAACCG-ACTTGCC 5564 Query 95025 CGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGGGA 95078 ||| || || | || || ||||||||||||||||||||||| | |||||| || Sbjct 5563 CGAACCCGTTGTACCGGCAACCAGCAGATGCGGCATCTTGGCGA-GTTCAGCGA 5511 >seq59 Length=142688 Score = 95.1 bits (104), Expect = 8e-15 Identities = 133/186 (72%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 94587 GGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAG 94646 ||| | |||| |||||| ||||| || | ||| ||||| || || ||||| || ||||| Sbjct 115942 GGGAATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGGGTGGCCAG 115883 Query 94647 GACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAAC 94706 || || || |||||||||||||||||||||||||| | || | ||| | || || Sbjct 115882 GATCAGGTGGATGCCGGCCGCACGCGCCTTCTGCGCCAAACGTGCGATGAGCTCTTCGAC 115823 Query 94707 CTCTTTCTTGTAGCCACCCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTA 94766 | |||||| | | |||||| | ||| |||| ||| || | | | ||||||| | Sbjct 115822 C---TTCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGATGAAGATCACGATGAA 115766 Query 94767 GGGGAG 94772 || || Sbjct 115765 CGGCAG 115760 >seq4407 Length=7959 Score = 93.3 bits (102), Expect = 3e-14 Identities = 191/280 (68%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 94788 GTGGCGCACGCCAGCCTCCTGCATCTGCCGGTATCGGTCGTCCATCTCT---ACGGTGAG 94844 || ||||||||| ||| ||||| ||||| ||||| |||||||| ||||| Sbjct 276 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 220 Query 94845 CCACCGCAGCGTTTTCACCGCCTCGTCAGCCTCTGTAACCACGGGCTGGAGAAGGTGGGG 94904 ||| ||||| | || |||| | | || || || |||||| ||| || || || Sbjct 219 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 160 Query 94905 GATACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAGTTTGACCC 94963 || |||| || | || || | ||| || || ||||||||||| || | | Sbjct 159 AATGCCGTCATAGATCGACAGTTCCAG-CATCTTCGGATCGATCATGATCAGGCGGCACT 101 Query 94964 GATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGC 95023 | || |||||| ||||| |||||||| | | ||| | ||||||| ||| || | Sbjct 100 GTTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTAC 41 Query 95024 CCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTT 95063 |||| ||||| | || || |||||||||||||||||||| Sbjct 40 CCGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340078792189136