Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_024359.1 Length=133048 Score E Sequences producing significant alignments: (Bits) Value seq153 122 7e-23 >seq153 Length=135117 Score = 122 bits (134), Expect = 7e-23 Identities = 332/503 (66%), Gaps = 4/503 (1%) Strand=Plus/Plus Query 92489 CAATCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTT 92548 || || || ||| | || || || || ||||| ||| || || | ||||| ||||| Sbjct 57119 CAGTCGTCGATCCTGGAAGGCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTG 57178 Query 92549 GTTCGTCAAAACAAGATGACGGGAACAGGTAAAATCATTAGCTTCATTAATCGTGATGAG 92608 || || || ||| ||||| || || || || ||||| |||||||| || || || || Sbjct 57179 GTCCGCCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAA 57238 Query 92609 TTAGCCCATTCGAAGTTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 92668 | ||||| | ||||| || || || || | || || | || || |||| | Sbjct 57239 CTGGCCCACACCAAGTTCATCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAG 57298 Query 92669 CTACAAACAGATGAACTAAATGACTACGTGTATGCTTCTTTTAGACATGCCGTAGAGCTA 92728 || || || | || | | |||||| | | | | || |||||| | | ||| Sbjct 57299 CTTCAGGGCGACCAGCTCACCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTG 57358 Query 92729 GAACAAGCG-TGGTCTAGTGAGGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAAAT 92787 ||| | ||| ||| | | ||||| || | ||||| || || || || ||||| || || Sbjct 57359 GAA-ACGCGCTGGACCGGCGAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGAT 57417 Query 92788 GTTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGCTAGGTCTCCAACCAAT 92847 | | ||| || || || || || || || ||| || ||||| || || | | Sbjct 57418 GATCCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGGCATCGAGAAGCT 57477 Query 92848 GTATCAAGGTCATACA-GAAAATTCTATGACATGGATTAAAGCTTACGCCGATAATTTTA 92906 ||| || | || | | || ||| | ||||| || || || ||||| ||||| | Sbjct 57478 GTA-CAGCGACACCAACGTCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTCA 57536 Query 92907 CAGAAACAAAAACCGACTTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAG 92966 | || || || |||||||| ||||| ||||| ||| | ||||||||||| || || | | Sbjct 57537 CCGAGACCAAGACCGACTTCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCGG 57596 Query 92967 ACAATGGGTTCGATGACTTATGA 92989 |||| || ||||| ||| | ||| Sbjct 57597 ACAACGGCTTCGACGACCTGTGA 57619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425575230226223