Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_024364.1 Length=131952 Score E Sequences producing significant alignments: (Bits) Value seq153 109 5e-19 >seq153 Length=135117 Score = 109 bits (120), Expect = 5e-19 Identities = 329/503 (65%), Gaps = 4/503 (1%) Strand=Plus/Minus Query 37997 TCATAAGTCATCGAACCCATTATCTAAATTTGTTTTCTTGTAACTAGAGTTACGCATTTC 38056 ||| | ||| ||||| || || || |||| || ||||||||||| | ||| ||||| || Sbjct 57619 TCACAGGTCGTCGAAGCCGTTGTCCGAATTGGTCTTCTTGTAACTGGCGTTGCGCATCTC 57560 Query 38057 GAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAGA 38116 ||| |||||||| || || || || || || ||||| || || || ||||| | ||| Sbjct 57559 GAAGAAGTCGGTCTTGGTCTCGGTGAAATTGTCGGCATAGGCCTTGATCCACGGCATCAC 57500 Query 38117 ATTTTC-TGTATGACCTTGATACATTGGTTGGAGACCTAGCATCCCTAACATTTTATTAG 38175 || | | || | || |||| | || || ||||| || ||| || || | Sbjct 57499 GTTGACGTTGGTGTCGCTG-TACAGCTTCTCGATGCCGAGCATGCCGGCCATCTTGTTGG 57441 Query 38176 CACGATATTTTACATAGTCTAACATTTCTTCCACATCAATTCCTTCAATGCCTTGTAGTA 38235 | || || || || ||| | ||| || ||||| || || || || ||||| | || | Sbjct 57440 CGCGGTACTTCACGTAGCGGATCATCTCGTCCACGTCGATGCCGTCGATGCCGTCCAGCA 57381 Query 38236 CCTCACTAGACCA-TGCTTGTTCTAGCTCTACAGCATGTCTAAAAGAAGCATACACGTAG 38294 |||| | | ||| || | ||| ||| | | ||||| || | | | | |||||| Sbjct 57380 CCTCGCCGGTCCAGCGCGT-TTCCAGCGCGATGGCATGCTCGAATGCATCGTGCACGTAA 57322 Query 38295 TCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCTCA 38354 | | || | || || || | |||| || || | || || | || || || Sbjct 57321 GCGGTGAGCTGGTCGCCCTGAAGCTGCTGGTTCTCGCCGATGATGGCGCGGATCAGTTCG 57262 Query 38355 GAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTGTT 38414 || ||||| | ||||| | || || || || |||||||| ||||| || || || Sbjct 57261 CTGATGAACTTGGTGTGGGCCAGTTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGGTG 57202 Query 38415 CCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAATTA 38474 || ||||| ||| || || || ||||| ||||| | || || ||| ||||| || Sbjct 57201 CCGGTCATGCGGTTCTGGCGGACCAGGTTGTAGAAAAACGCGAAGCCGGAATAGAAGTTG 57142 Query 38475 ATACCCTCTAAGATAGATGATTG 38497 || || || | ||| || || || Sbjct 57141 ATGCCTTCCAGGATCGACGACTG 57119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422068471643511