Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_024383.1 Length=135831 Score E Sequences producing significant alignments: (Bits) Value seq153 136 3e-27 >seq153 Length=135117 Score = 136 bits (150), Expect = 3e-27 Identities = 615/965 (64%), Gaps = 10/965 (1%) Strand=Plus/Plus Query 96205 AGTGGTATCGTAAACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAG 96264 || || ||| | |||||||| || || | || ||||| ||||| || || ||||| ||| Sbjct 56660 AGCGGCATCCTGAACTGGAATGACATCCCCTACCCGTCCTTCTACCGGGCCTACAAGGAG 56719 Query 96265 TTAACTACAAATTACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTAC 96324 | | || || | |||| | || || || || || |||||| |||| || ||| Sbjct 56720 CTGTCGACCAACTTCTGGATCCCCGACGAAGTGGACATGAAGGGCGACGCGCGCGGCTAC 56779 Query 96325 AACCACTT--ATCCGAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTA 96382 | | || || || ||| |||| | || || || ||||| || | || | Sbjct 56780 GGTGAGCTCAATGCGCGC--GAAAAGAATGCCTACGATTCGATCATCGGCCTGCTGGCCA 56837 Query 96383 CACTTGACTCACCCCAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCT 96442 | || ||||| || || || || || || || || | || ||||| ||| || | Sbjct 56838 CGCTCGACTCGCCGCAGACCCGCTTCATCTACAACGTGGCCGAGTACATCACCGACCCGG 56897 Query 96443 CCGTTCATGCTATTACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATT 96502 ||| ||||| | | || ||||| | || || || | || || || ||||| || Sbjct 56898 CCGCGCATGCCAACGCCGCGATCATCGGCCAGCAGGAGGTGATCCACAACGAGAGCTACA 56957 Query 96503 CTTATGTACTTGCTTCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTA 96562 || ||||| ||||| || | | || ||||| || || || || || Sbjct 56958 GCTACGTACTGGCTTCCATCGCCGGGCTGGCCGACCAGAACCGCGTGTTCGAAATCGCCC 57017 Query 96563 GAACACACCCTACGATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCA 96622 | || || || || || | || || || || ||| |||| || ||||| |||| Sbjct 57018 GCACGCATCCCACCATCCTGGCGCGCAACCAGCCGATCATGCAGTCCTACGACGACTTCA 57077 Query 96623 TGAATAACAAAACACCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGG 96682 || | || || | |||| || | | | | || || || ||| | || | Sbjct 57078 TGCGCGAGAAGACCGCCGAGACCCTGATCCGGTCGCTGATCCAGTCGTCGATCCTGGAAG 57137 Query 96683 GTATTAATTTCTACAGCGGTTTTGCTTACTTCTACAACCTCGTTCGTCAAAACAAGATGA 96742 | || || ||||| ||| || || | ||||||||||| || || || ||| |||| Sbjct 57138 GCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTGGTCCGCCAGAACCGCATGA 57197 Query 96743 CGGGGACAGGTAAAATCATTAGCTTCATTAATCGTGATGAATTAGCCCATTCGAAATTTA 96802 | || || || || ||||| |||||||| || || || ||| | ||||| | || || | Sbjct 57198 CCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAACTGGCCCACACCAAGTTCA 57257 Query 96803 TTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAA 96862 | || || || | || || | || || |||| | || || || | || | Sbjct 57258 TCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAGCTTCAGGGCGACCAGCTCA 57317 Query 96863 ATGACTACGTGTACGCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGT 96921 | |||||| ||| | | || |||||| | | ||| ||| | ||| ||| | | Sbjct 57318 CCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTGGAA-ACGCGCTGGACCGGC 57376 Query 96922 GAGGTACTACAAGGCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATAT 96981 ||||| || | ||||| || || || || ||||| || ||| | ||| || || || Sbjct 57377 GAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGATGATCCGCTACGTGAAGTAC 57436 Query 96982 CGTGCTAATAAAATGTTAGGGATGTTAGGTCTTCAACCAA-TGTATCAAGGTCACACA-G 97039 || || || || ||| || ||| | || | || | | |||| || | ||| | | Sbjct 57437 CGCGCCAACAAGATGGCCGGCATGCTCGG-CATCGAGAAGCTGTA-CAGCGACACCAACG 57494 Query 97040 AAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACT 97099 || ||| | ||||| || || || ||||| || || || || || || ||||||| Sbjct 57495 TCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTCACCGAGACCAAGACCGACT 57554 Query 97100 TTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACT 97159 | ||||| ||||| ||| | ||||||||||| || || | ||||| || ||||| ||| Sbjct 57555 TCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCGGACAACGGCTTCGACGACC 57614 Query 97160 TATGA 97164 | ||| Sbjct 57615 TGTGA 57619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434475107453720