Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq8774 89.7 5e-13 seq33 82.4 8e-11 >seq8774 Length=609 Score = 89.7 bits (98), Expect = 5e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 132311 GGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACTGAGCTACCAGT 132370 ||| ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||| Sbjct 516 GGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGG 457 Query 132371 CCAAGGCGC 132379 ||||||||| Sbjct 456 CCAAGGCGC 448 >seq33 Length=92283 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 132300 TGGACTGAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACT 132359 ||| ||| | ||| ||||||| |||||||| ||||||||| || |||||||||| ||| Sbjct 63211 TGGCCTGGGGCGGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACT 63270 Query 132360 GAGCTACCAGTCCAA 132374 |||||||||| |||| Sbjct 63271 GAGCTACCAGGCCAA 63285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512705007647720