Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq3870 89.7 5e-13 >seq3870 Length=345 Score = 89.7 bits (98), Expect = 5e-13 Identities = 184/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 35219 ATCAGGGTAAAGACGCTTACTAGAACATTCCAATGCAAGTTGCTTAATGTCGTAGTTCGG 35278 ||| || || | ||||| || | || |||| || || || || |||||||||||||| Sbjct 299 ATCCGGATACATGCGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTTCGG 240 Query 35279 ATCTTCCGGTTTAAGGTTTAATCCTTCTTCTAAGAAC-ATCACCAGCTTAGGAAACACCG 35337 ||| | |||| |||| | || || | || | | |||||| || || ||||||| Sbjct 239 ATCGCCTTTTTTATGGTTCAGACCATC-GCGAATCGCAAACACCAGTTTCGGGAACACCG 181 Query 35338 GAGTGATACCATCTTTACCTAAACCTTTAGTTCGAACTTTCAGGATCGCTTTCTGAATCA 35397 ||| ||| | |||||| | ||| | || |||||||| || |||||||| Sbjct 180 CAGTTTTACGGTTTTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGAATCA 121 Query 35398 GTTTTTCTTCCCAGCTAGTACCCATACCAAATGTTAAAGTCACAAAAGGTGTTTGACCGT 35457 | ||||||||| || |||| |||||| || || ||||| || || ||||||| Sbjct 120 GGCGCGATTCCCAGCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTCTGACCGT 61 Query 35458 TGGTGGAGAACAAAGTGTTGATTTCATATTC 35488 ||| || | || ||||| | ||| || || Sbjct 60 TGGCGGTGTGCAGGGTGTTTACTTCGTACTC 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522761309337280