Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_025440.1 Length=134369 Score E Sequences producing significant alignments: (Bits) Value seq153 125 6e-24 >seq153 Length=135117 Score = 125 bits (138), Expect = 6e-24 Identities = 335/504 (66%), Gaps = 6/504 (1%) Strand=Plus/Minus Query 75664 TCATAAGTCATCGAACCCATTGTCTAAGTTTGTTTTCTTGTAACTAGAGTTACGCATTTC 75723 ||| | ||| ||||| || ||||| | || || ||||||||||| | ||| ||||| || Sbjct 57619 TCACAGGTCGTCGAAGCCGTTGTCCGAATTGGTCTTCTTGTAACTGGCGTTGCGCATCTC 57560 Query 75724 GAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAGA 75783 ||| |||||||| || || || || || || ||||| || || || ||||| | ||| Sbjct 57559 GAAGAAGTCGGTCTTGGTCTCGGTGAAATTGTCGGCATAGGCCTTGATCCACGGCATCAC 57500 Query 75784 ATTTTC-TGTGTGACCTTGATACA-TTGGTTGAAGACCTAGCATCCCTAACATTTTATTA 75841 || | | ||| | || |||| | | || | || ||||| || ||| || || Sbjct 57499 GTTGACGTTGGTGTCGCTG-TACAGCTTCTCGATG-CCGAGCATGCCGGCCATCTTGTTG 57442 Query 75842 GCACGATATTTTACATAGTCTAACATCTCTTCCACATCAATTCCTTCAATGCCCTGTAGT 75901 || || || || || ||| | |||||| ||||| || || || || ||||| | || Sbjct 57441 GCGCGGTACTTCACGTAGCGGATCATCTCGTCCACGTCGATGCCGTCGATGCCGTCCAGC 57382 Query 75902 ACCTCACTAGACCA-CGCTTGTTCTAGCTCTACGGCATGTCTAAAAGAAGCATACACGTA 75960 ||||| | | ||| ||| | ||| ||| | | |||||| || | | | | |||||| Sbjct 57381 ACCTCGCCGGTCCAGCGCGT-TTCCAGCGCGATGGCATGCTCGAATGCATCGTGCACGTA 57323 Query 75961 GTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCTC 76020 | | || | || || || | |||| || || | || || | || || || Sbjct 57322 AGCGGTGAGCTGGTCGCCCTGAAGCTGCTGGTTCTCGCCGATGATGGCGCGGATCAGTTC 57263 Query 76021 AGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTGT 76080 || ||||| | ||||| | || || || || |||||||| ||||| || || || Sbjct 57262 GCTGATGAACTTGGTGTGGGCCAGTTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGGT 57203 Query 76081 TCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAATT 76140 || ||||| ||| || || || ||||| ||||| | || || ||| ||||| || Sbjct 57202 GCCGGTCATGCGGTTCTGGCGGACCAGGTTGTAGAAAAACGCGAAGCCGGAATAGAAGTT 57143 Query 76141 AATACCCTCTAAGATAGATGATTG 76164 || || || | ||| || || || Sbjct 57142 GATGCCTTCCAGGATCGACGACTG 57119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429801898189510