Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq250 197 2e-45 seq5011 149 7e-31 seq1432 127 2e-24 >seq250 Length=59172 Score = 197 bits (218), Expect = 2e-45 Identities = 232/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 || ||||||||| ||| | |||||||| |||||||| ||||| ||||| ||| Sbjct 46320 TCAACGTGGTTGGAGTACAGATGCGCGTCGCCCAGGGTATGCACGAAGTCGCCCACGCCC 46379 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 || ||||| | || |||||||||| ||||||||| | ||||||||| |||||||| || Sbjct 46380 AGCCCGGTGGCCTGCGCCACCATGTGGGTGAGCAGTGCGTAGCTGGCGATGTTGAACGGC 46439 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 || |||||| ||||| || | |||||||| |||||| ||||| ||||| || Sbjct 46440 ACGCCCAGGAAGATGTCGCCGCTGCGCTGGTACAACTGGCAGCTGAGCTTGCCGTCCACC 46499 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| ||||| ||||||| ||| || |||||| | ||| || | | Sbjct 46500 ACGTAGAACTGGAACAGGTTGTGGCAGGGCATCAACGCCATCTGCGACAGCTCGCCCACG 46559 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 |||||||| |||||||||||||| |||||||| | ||| ||||| || | | | Sbjct 46560 TTCCAGGCGCTGACCACCAGCCGCCGCGAATCGGGGTTGCGCTTGATCTCCTCCACCAGC 46619 Query 147226 CACCTCAGCTGGTC 147239 ||| || |||||| Sbjct 46620 CACTGCATCTGGTC 46633 >seq5011 Length=2423 Score = 149 bits (164), Expect = 7e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| |||| ||||| || ||||| ||||| || || || ||||||| Sbjct 368 GCTCGAAATGGTTGGCATAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCT 427 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || || || || || ||||||||| ||| ||||| | ||| || || ||||| | Sbjct 428 GCAGACCCGTGACCTGCGCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACG 487 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || || || || || | || | |||||| |||||||| || |||| ||||||| Sbjct 488 GCACGCCGAGAAAGATATCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGG 547 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| ||||| |||||| |||||||||||||| | | | ||| | Sbjct 548 CCACGTAGAACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCG 607 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCC 147190 | ||||| || || || | ||| |||| Sbjct 608 GATTCCATGCGGAAACGATCAGACGCC 634 >seq1432 Length=12607 Score = 127 bits (140), Expect = 2e-24 Identities = 186/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 || ||||| ||| ||||||||| ||| || || || ||||| || |||| Sbjct 8994 TCGACGTGATTGTCGTAGACGTGGCAGTCTCCGCCCGTCCAGACGAAGTCTCCGGGCTCG 8935 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 ||||| | ||||| | ||| ||| |||| | |||| ||| |||||||| || Sbjct 8934 AGGCCCACCTGCTGGGCGATCATCATGGTCAGCAAGGCGTAGGAGGCGATGTTGAACGGC 8875 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 || || ||| |||||| | | ||| |||||||| |||||||||| |||||||| Sbjct 8874 ACACCGAGGAACATGTCGGCGCTGCGCTGATACAGCTGACACGAGAGCTTGCCGTCGGCG 8815 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| |||| ||| || |||| ||||||||| | || | ||| || ||| Sbjct 8814 ACGTAGAACTGGAACAGCGCGTGACAGGGCGCGAGCGCCATGTCCGGGATGTCGGCCGGG 8755 Query 147166 TTCCAGGCCGAGACCACCAGCCG 147188 |||||||| || || | ||||| Sbjct 8754 TTCCAGGCAGACACGATGAGCCG 8732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583412678992800