Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq1940 138 5e-28 >seq1940 Length=14353 Score = 138 bits (152), Expect = 5e-28 Identities = 249/359 (69%), Gaps = 4/359 (1%) Strand=Plus/Minus Query 62725 CATGGCCGGTGAAACCACCATAACGGTGATAGGCAATCTGACGAACGATCCCGAATTACG 62784 ||||||||| |||||| ||| || ||| | || || || ||| ||| ||||| | || Sbjct 12938 CATGGCCGGCGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCGAGCTGCG 12879 Query 62785 GTTCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCCCGCGCACGTT 62844 | ||||| | ||| |||||||| ||||||||||| || || || || | || Sbjct 12878 CTACACGCAGAACGGGCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCTCGGAACTT 12819 Query 62845 CGACCG-GCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGCGCGAGTATCT 62903 |||||| || | | || |||||||||||||| || | ||||| | || || ||| Sbjct 12818 CGACCGTGCCGCG-AATGAGTGGAAGGACGGCGATGCGCTGTTCCTCCGTGCATCCGTCT 12760 Query 62904 GGCGCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCGTGATTGTGT 62963 ||||||| ||| ||| ||||||| | || |||| |||||||||||||| || | | Sbjct 12759 GGCGCGAGTTCGCCGAGCACGTGGCGGGTTCGTTGACGAAGGGCATGCGCGTCATCGCG- 12701 Query 62964 CCGGGCGGCTCAAGTC-CCGCAGCTACGAGACCAAGGAAGGCGAAAAGCGCACGGTCATT 63022 | |||| | ||| ||| |||| || | || ||| | ||||||| | || Sbjct 12700 CAGGGCCGTCTGCGTCAGCGCTCCTACCAGGACCGCGAGGGCAACCAGCGCACCGCGATC 12641 Query 63023 GAGCTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGGTGAACCG 63081 ||||| ||||| ||||| || ||||| || | || || || | ||| |||| | ||| Sbjct 12640 GAGCTGGAGGTCGACGAGATCGGCCCCTCGCTCCGGTACGCGACCGCGCAGGTCACCCG 12582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227686539693767