Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq1432 96.9 2e-15 seq250 96.9 2e-15 >seq1432 Length=12607 Score = 96.9 bits (106), Expect = 2e-15 Identities = 121/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 21689 CTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCG 21748 || |||||||||||||| ||||||||||| || ||||| |||||||||||| |||||| Sbjct 8840 CTGTATCAGCGCAGCGCCGACATGTTCCTCGGTGTGCCGTTCAACATCGCCTCCTACGCC 8899 Query 21749 CTGCTGACGCACCTCATG-GCGGCCA--CGGTCGGCATGCAGGCCGAGAAGTTCATCTGG 21805 ||||||| | | ||| || ||| ||| ||| | || ||| | ||| ||||| Sbjct 8900 TTGCTGAC---CATGATGATCGCCCAGCAGGTGGGCCTCGAGCCCGGAGACTTCGTCTGG 8956 Query 21806 TCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 21848 | ||||| ||||||||| | ||| || ||| | || |||| Sbjct 8957 ACGGGCGGAGACTGCCACGTCTACGACAATCACGTCGATCAGG 8999 >seq250 Length=59172 Score = 96.9 bits (106), Expect = 2e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 21677 CTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATC 21736 || |||||| | | || |||||||||| ||||| |||||||||||||| ||||||||| Sbjct 46486 CTCAGCTGCCAGTTGTACCAGCGCAGCGGCGACATCTTCCTGGGCGTGCCGTTCAACATC 46427 Query 21737 GCCAGCTACGCGCTGCTGACGCACCTCATGGCG 21769 ||||||||||| ||||| || ||| | ||||| Sbjct 46426 GCCAGCTACGCACTGCTCACCCACATGGTGGCG 46394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236267859510221