Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq98 87.8 4e-13 >seq98 Length=166217 Score = 87.8 bits (96), Expect = 4e-13 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 15459 TCCCCAGTCCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTC 15518 || || |||||||| ||| || |||| |||| ||||| ||| ||||| ||| Sbjct 136173 TCGCCTGTCCAGAAATCGTAGGCTTCGTGCGCCATGGTGGAAGGCGTGCTGAAGTAGGTC 136114 Query 15519 TTGCGCCACTTCTTATGCGTGGCCAT--CGCTGAGGCGACTTTGTTCAGCTCGTCAAACT 15576 |||||||| ||||| ||| | ||||| ||||| ||||| |||||||||| || || Sbjct 136113 TTGCGCCATTTCTTGTGCATCGCCATGCCGCTG--GCGACCTTGTTCAGCTGGTTGAAGC 136056 Query 15577 TGCCGATCCAGAAATACTCATCCACATACACATGGCCGTGGTAACTCTGCGCTGTTTTGC 15636 | | ||||||| | || || | || | || |||||||| | |||||| || Sbjct 136055 CGTAGGTCCAGAAGAATTCGTCGAAGTAGAAATTCCCGTGGTAGCCCTGCGCGGTGCGTG 135996 Query 15637 CATTGGTAGACAGGAAATGCAGCTCAGCGCCATT 15670 | ||||| ||| || |||||||||||| || Sbjct 135995 CGTTGGTGCCCAGAAAGAACAGCTCAGCGCCGTT 135962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108114739925460