Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq44 95.1 4e-14 >seq44 Length=77107 Score = 95.1 bits (104), Expect = 4e-14 Identities = 203/294 (69%), Gaps = 22/294 (7%) Strand=Plus/Plus Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038 |||||||| | || || ||||| || || ||||||||||| || || ||||| || | Sbjct 9523 TACCAATGCTTCGCGTCTTCAATGACACTGCCCGCTACGTCGACCAGGGTGGCGGAAAGC 9582 Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTTT 255095 || || || || || ||||||| ||||| ||||||||||| | |||| ||| Sbjct 9583 GCAAGGGTGCCTTTGCCGTCTACCTCGAGCCATGGCACGCCGACGTCTTTGA---GTTCC 9639 Query 255096 TACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCG 255152 | || | | || ||||| ||||| |||||| || ||||||||| ||| | || Sbjct 9640 T--TGATCTTCG-CAAGAACCACGGCAAGGAGGAGATGCGTGCCCGCGACCTCTTCTACG 9696 Query 255153 CTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA-----GACCTGGAG 255207 | ||||| || |||||||| ||| || ||||| |||||| | || |||||| Sbjct 9697 CGCTCTGGGTCTCTGATCTGTTCATG-GA-GCGTG--TCGAGACCAACTCTGA-CTGGAG 9751 Query 255208 CCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTT 255261 ||| | |||||||| | || || || | ||| | ||||| || ||||| Sbjct 9752 TCTCTTCTGTCCCAATGAGGCACCTGGCCTCGCCGAGTGCTGGGGAGATGAGTT 9805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588125839818515