Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028695.2 Length=40491 Score E Sequences producing significant alignments: (Bits) Value seq332 174 4e-39 seq447 158 3e-34 >seq332 Length=28461 Score = 174 bits (192), Expect = 4e-39 Identities = 614/939 (65%), Gaps = 24/939 (3%) Strand=Plus/Plus Query 13397 CTCTCGCAGATATGAAGGTTTATAACGACGACATCGT--CGGCACCACAATTGAATTGCT 13454 ||||||||||| | |||||| ||| | ||||| | |||| | || || ||| Sbjct 14053 CTCTCGCAGAT--GCAGGTTTTCAACAAGTACATCATGCCGGCG--ATCATCGAGACGCT 14108 Query 13455 CGGCCAGAAAACCGACCAGTTCAACGCGGCTTCCGGTGGCGCTATCGTACTGTCTACCGC 13514 |||||| | | | | ||||||| ||||| ||||| ||||| ||| | ||||| || | Sbjct 14109 GGGCCAGCAGATCCAGAAGTTCAATGCGGCGTCCGGCGGCGCCATCATGCTGTCGACGGG 14168 Query 13515 CGCCTGGCGTGGTGACTTCTCCCGCGAATCTTTCTTTAACCAGATTGCTTCCGCGAAACG 13574 | |||| || |||||| || ||||| |||| | | || |||| || Sbjct 14169 TGGCTGGGAGGGCGACTTCCTCCAGGAATCGTTCTATGCCGCCATCCACAGCGCGCGCCG 14228 Query 13575 TCGTGTTGACCGCTACGCCGCAATCG-CTACCCAAGCGGCAACTGCTCTTACCCAGGGCG 13633 || || || ||||||||| | | || | || | | | | || | ||| |||||| Sbjct 14229 CCGCGTCGATCGCTACGCCTCCAACGGCAACGCGACCC-CGACCGATCTGACCCAGCTGA 14287 Query 13634 AGCACGTAGGCGTTAAAGTCGCTGGTGGTTTCGGTCCTGTTCTGTTCGAACCGGCGCAAA 13693 ||||| || || ||||| || || ||||| || | | |||||||||| || | Sbjct 14288 AGCACAGCTCGGTGAAGGTCGCCGGCGGCTTCGGCCCCATCCGCTTCGAACCGGGTCAGA 14347 Query 13694 TGACCTGGCTGAACGAAGACC-CGGCGTCCGCTATCCGCG-CGATTTCCGAAGGCTTCTC 13751 |||||||||||||| ||| || |||| | ||| | || | || | |||| | Sbjct 14348 TGACCTGGCTGAAC-AAGCCCACGGCCGAAGGCATCGAGGTCGCCTCGCGCAA-CTTCGC 14405 Query 13752 TGATGCGCTGCTGGCTGACCAGCTCAACACTGCGGTAGGCTCCGCTGTTGCCGCAGTGTC 13811 || ||| ||||| || ||||| ||| | || | | | || || ||||| | Sbjct 14406 CGAGGCGTTGCTGCAGGATCAGCTGAACTCCGCCATCGCCGCCAGCGTGGCCGCCATCAG 14465 Query 13812 CGGCCAGGCTGCTCTGGTTAATGACGTATCCGCAACCGGTGGTCTGACCCTGAACGTGCT 13871 | |||||| || || ||||| || || || || |||||| | ||| Sbjct 14466 CAACCAGGCCGCGGCCACGAACGACGTTTCGGCGACGCTCGGCCTGACCTACTCGGCGCT 14525 Query 13872 GAACAACAGCCACGCTAAATTCGGCGACCAGTCACAGCTTC-TGGTGACCGACGTTATGA 13930 |||| || ||||| || || |||||| || |||| | | ||| | |||| |||| Sbjct 14526 GAACGACGCGCACGCCAAGTTTGGCGACAGCTC-CAGCCTGATCGTGGCGAACGTGATGA 14584 Query 13931 CCGGCGCGGCATGGCACAAGCTGATTGACAAGGCGCTGACCAACTCAAGCCAGTTGTTCG 13990 ||||| || | ||||||||||| | | || ||| ||||| | ||| ||||| Sbjct 14585 CCGGCCAGGTGTATCACAAGCTGATCGGCCAGAACCTGGCCAACGCCCAGCAGCTGTTCC 14644 Query 13991 CCTCCGGCAACGTTATGGTCGTTGATATCCTGGGTAA-ACGTTATGTTATCTCTGATATC 14049 | ||| ||| | || || || |||||||| || ||| | || | | || Sbjct 14645 AGTATGGCGCCGTCACTGTGGTCGACATCCTGGGCAAGACGGTG-GTCGTGACCGACGCA 14703 Query 14050 CCGGCTCTGTACGAAGCTGGTACCCCGAACAAGTCGAAAGTGCTGT--CTG-TCGTGGCT 14106 ||||| ||||||| | || || || ||| | ||| |||||| ||| ||| || Sbjct 14704 CCGGCCCTGTACGCCACGGGCACTCCCAACCTGCAGAAGGTGCTGGGCCTGGTCGCGGGC 14763 Query 14107 AACGGTATTATCGTTGATA-ACGCGTCCGACATCATCAGCAACGTCGACACGTCAAACGG 14165 || | || ||| | ||| ||| |||||| |||| ||||||| | ||||| Sbjct 14764 GCCGCGA----CGGTGACCGATGCGGGTGACGTCATCACCAACATCGACACCACCAACGG 14819 Query 14166 CAACACCCGCATCCAGACCACCTGGCAGGCTGACTACACCTTCGGTCTGAAACTGAAGGG 14225 ||| |||||| | ||||| ||||| || ||||||||||| ||| |||||||| Sbjct 14820 CAAGGAGCGCATCGAAACCACGATGCAGGTGGATTACACCTTCGGCCTGGGCCTGAAGGG 14879 Query 14226 TTACTCCTGGGACGTTGCGAACGGCGGCAAATCACCACTGGACGCAGAGCTGTTTACCGC 14285 ||| ||||||||| || ||||||||||| || || ||||| |||||| || | Sbjct 14880 CTACACCTGGGACGAGGCCAACGGCGGCAAGTCGCCGACCGACGCCGAGCTGGCCACGGG 14939 Query 14286 GACCAACTGGGACAAAGCGGTTGCCGAAAACAAACATAC 14324 |||||||||||||| | || |||| | ||||| || Sbjct 14940 CACCAACTGGGACAAGGTGGCCACCGACATTAAACACAC 14978 >seq447 Length=48793 Score = 158 bits (174), Expect = 3e-34 Identities = 556/846 (66%), Gaps = 38/846 (4%) Strand=Plus/Plus Query 13474 TTCAACGCGGCTTCCGGTGGCGCTATCGTACTGTCTACCGCCGCCTGGCGTGGTGACTTC 13533 |||||||| || | ||||||| ||||| |||||| | | || || |||||||||| Sbjct 18481 TTCAACGCCGCAAGCCGTGGCGCAATCGTGCTGTCTCCTGACGGCTTCACTGGTGACTTC 18540 Query 13534 TCCCGCGAATCTTTCTTTAACCAGA---TTGCTTCCGCGAAACGTCGTGTTGACCGCTAC 13590 || || || ||||| ||||| | || | || | || || || || |||||| Sbjct 18541 CTCCAAGAGTCGTTCTT---CCAGACCTTGGCCGCTGCCCAGCGCCGCGTGGATCGCTAC 18597 Query 13591 GCCGCAATCGCTACCCAAGCGGCAACTGCTCTTACCCAG--GGCGAGCACGTAGGCGTTA 13648 | | | ||| | || ||||| | ||| || || | || || | || | | Sbjct 18598 AGCACGAACGCCGCTGTCGCTGCAACCGATCTGACTGAGCTGAAGAATACTTCGGTG--A 18655 Query 13649 AAGTCGCTGGTGGTTTCGGTCCTGTTCTGTTCGAACCGGCGCAAATGACCTGGCTGAA-C 13707 | ||||| ||||| |||||||| | | | ||| || |||| ||||| |||||| | | Sbjct 18656 AGGTCGCCGGTGGCTTCGGTCCGATCCGCTACGAGCCATCGCAGATGACTTGGCTGGAGC 18715 Query 13708 GAAGACCCGGCGTCCGCTATCCG---CGCGATTTCCGAAGGCTTCTCTGATGCGCTGCTG 13764 | | ||| || | ||| ||| | | || ||| |||| |||||| Sbjct 18716 GTCCAACCG-CGCAAGGCATCGAAGTCGCCAGTCGCGCG---TTCGCTGAAATCCTGCTG 18771 Query 13765 GCTGACCAGCTCAACACTGCGGTAGGCTCCGCTGTTGCCGCAGTGTCCGGCCAGGCTGCT 13824 |||||||| ||||| ||| | | | || |||||||| | ||| |||||| || Sbjct 18772 AAGGACCAGCTGAACACAGCGATCGCCGCCCTGGTTGCCGCGATCACCGCCCAGGCCGCC 18831 Query 13825 CTGGTTAATGACGTATCCGCAACCGGTGGTCTGACCCTGAACG-TG--CTGAACAACAGC 13881 ||| || || || || || |||| ||| | ||| ||| || ||||||||| Sbjct 18832 GCGGTCAACGATGTGTCGGCTACCGCTGGCATCACCT---ACGCTGGCCTGAACAACGCA 18888 Query 13882 CACGCTAAATTCGGCGAC-CAGTCACAGCTTCTGGTGACCGACGTTATGACCGGCGCGGC 13940 ||||| || ||||||||| || | ||| ||||| ||| | || ||| ||| || Sbjct 18889 CACGCGAAGTTCGGCGACGCAAGC-CAGAACCTGGTCACCCAGGTGATGCAGGGCACGAG 18947 Query 13941 ATGGCACAAGCTGATTGACAAGGCGCTGACCAACTCAAGC--CAGTTGTTCGCCTCCGGC 13998 | |||||| || ||| | || ||| | ||| ||| ||| ||||| ||||| Sbjct 18948 CTATCACAAGTTGGTTGGCCAGAACCTGGCGAACC--AGCAGCAGCTGTTCCAGGCCGGC 19005 Query 13999 AACGTTATGGTCGTTGATATCCTGGGTAAACGTTATGTTATCTCTGATATCCCGGCTCTG 14058 ||||| || || || || || || || | ||| | | ||| |||||| ||| Sbjct 19006 AACGTCCGCGTGGTGGACATTCTCGGCAAGATCTCCGTTGTGACGGATGCCCCGGCGCTG 19065 Query 14059 TACGAAG-CTGGTACCCCGAACAAGTCGAAAG--TGCTGTCTGTCGTGGCTAACGGTATT 14115 | | || | || |||||||||||| |||| | ||||| | ||| || | Sbjct 19066 -ATGCAGACCGGCACCCCGAACAAG--GAAATCATCCTGTCCCTGGTGCAAGGCGCTGCG 19122 Query 14116 ATCGTTGATAACGCGTCCGACATCATCAGCAACGTCGACAC-GTCAAACGGCAACACCCG 14174 ||||| | ||| ||||||||||||||||||| | || ||| |||||||| || Sbjct 19123 CTCGTTCACGACGGCCGCGACATCATCAGCAACGTCCAGACTGTC-AACGGCAAGGAGCG 19181 Query 14175 CATCCAGACCACCTGGCAGGCTGACTACACCTTCGGTCTGAAACTGAAGGGTTACTCCTG 14234 ||| | ||||| ||| | ||||||||||||||| || |||||||| ||| |||| Sbjct 19182 TATCGAAACCACGCTGCAAACCGACTACACCTTCGGTTTGGGCCTGAAGGGCTACACCTG 19241 Query 14235 GGACGTTGCGAACGGCGGCAAATCACCACTGGACGCAGAGCTGTTTACCGCGACCAACTG 14294 |||| | | ||||||||| || || ||||| || ||| |||| |||||||| Sbjct 19242 GGACACCACCACCGGCGGCAAGTCGCCTACCGACGCCGAACTGGCGACCGGTACCAACTG 19301 Query 14295 GGACAA 14300 |||||| Sbjct 19302 GGACAA 19307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129433725191022