Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq71 98.7 9e-16 >seq71 Length=600064 Score = 98.7 bits (108), Expect = 9e-16 Identities = 266/406 (66%), Gaps = 16/406 (4%) Strand=Plus/Plus Query 96699 CCACCAAATAGTCCATGCACACTTTCATCACGAATGATTAAGTTAATAATTTCACCACTT 96758 ||| |||||| ||||| | | |||||| |||||| ||||| || || |||| Sbjct 222710 CCAACAAATACACCATGTATAGATTCATCGGCAATGATCTTTTTAATGATATCGGCACTG 222769 Query 96759 GCAACCATCTTCCCTTGACCAGCCAAATACAGAGGGTAA--AAGAAACCACTATAAAATA 96816 || ||||| | ||||| || |||| || |||| | ||||| || || ||||| | Sbjct 222770 GCGACCATTTCACCTTGTCCG--CAAAGCCAAAGGGGCATAAAGAATCCGCTGTAAAACA 222827 Query 96817 GGAACGACTCTAAGAACACAGAGGCTACAATTGCCATATATAAGTCTT-----------T 96865 | || || || | | || || || | | |||| | || |||| | Sbjct 222828 GAAAAGATTCCAGCAGAACCGAAGCGCCCAAAGCCAGGAACAATTCTTCATCATTCACCT 222887 Query 96866 CTTTGTT-TCAATGTTGCGGTAATATTTGTCAATGATAGACACTTTCTTTTGTAGATATT 96924 ||| || || | | ||||||||| |||||| | | |||| || || |||| Sbjct 222888 GTTTTTTGTCCAGGGCGCGGTAATAGCGGTCAATTGTTGCTGCTTTAAACTGCAGGTATT 222947 Query 96925 TATTCTCAGCGACCCAATCAAATACATCGTCGATTTCTTCCTTTGTGGCTAATGTTGTAA 96984 | || || ||||| ||||| | || | |||||||| | |||| | ||||||| Sbjct 222948 TGTTGGCATGTACCCAGTCAAAAAGTTCATTGATTTCTTGTGTAGTGGTCACGGTTGTAA 223007 Query 96985 AAATTGTACTATAAGATTTTGCATGGATGCCTTCCATCATTCCCATAAAAGACAAGACAG 97044 |||| || ||| ||||||||||| ||| |||||||||| | ||||||||| | || | Sbjct 223008 AAATCGTGGAATAGGATTTTGCATGAATGGCTTCCATCATACACATAAAAGAAAGCACGG 223067 Query 97045 ATTTCTTAGCAAGGTCATTTATATGGTCTAAGATTTTTGGCATACC 97090 ||| || || || |||||||| | ||||| ||||| || Sbjct 223068 CTTTATTTTGCAGCGAATCAATATGGTCCAGAATTTTGGGCATTCC 223113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429485138062057