Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028778.1 Length=75626 Score E Sequences producing significant alignments: (Bits) Value seq2859 84.2 1e-11 seq3582 82.4 4e-11 >seq2859 Length=8594 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 63637 CGGTAGCTCAACTGGTAGAGCAGTGGTCTCCAAAGCCACCGGTTGCAGGTTCGACTCCTG 63696 ||||||||||| ||| ||||||| |||||||||| || | |||||||||||||| ||||| Sbjct 3496 CGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 3555 Query 63697 TCCG 63700 |||| Sbjct 3556 TCCG 3559 >seq3582 Length=4429 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 65540 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA 65594 ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1790 GGGATCGAACCTACGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTA 1736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241847957108989