Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq3870 91.5 2e-13 >seq3870 Length=345 Score = 91.5 bits (100), Expect = 2e-13 Identities = 200/296 (68%), Gaps = 8/296 (3%) Strand=Plus/Plus Query 120515 ACGATGCATTCCAAGCTTATGAATATGAAGTAAATACTCTCTTTAGTTCAAACGGACAGA 120574 ||||||| ||||| | || || |||||||| || || | | ||||| |||| Sbjct 10 ACGATGCCTTCCAGTCGCTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGA 69 Query 120575 CTCCTTTTGTAACAATTACATTTGGTACGGGAACTGACTGGACTGAA---CGAATGATTC 120631 | || |||||||| || |||||| ||| || |||| ||| || |||||| Sbjct 70 CGCCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGG---GAATCGCGCCTGATTC 126 Query 120632 AGAAAGCAATTCTGAAAAATCGTATTAAAGGTCTTGGTCGTGATGGGATAACTCCTATTT 120691 || || | || ||| || ||||| ||| || ||| | | | |||| | | | Sbjct 127 AGGAATCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGT 186 Query 120692 TCCCTAAGCTTGTTATGTTCG-TTGAAGAAGGTGTTAATCTTTATAAAGACGATCCGAAC 120750 |||| || || || | | || || || ||| | || | | | |||| |||||||||| Sbjct 187 TCCCGAAACTGGTGTT-TGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAAC 245 Query 120751 TATGATATTAAGCAGCTTGCTCTAGAGTGCGCAAGCAAAAGGATGTATCCTGATAT 120806 || || || || ||||| || || |||||||||||||| | |||||||| ||||| Sbjct 246 TACGACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATAT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534599780941280