Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq34 91.5 4e-14 seq54 87.8 5e-13 >seq34 Length=101160 Score = 91.5 bits (100), Expect = 4e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 31252 TTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTAC 31311 ||||||||| |||| ||||||||||| |||||||| || ||| | || |||||||||| Sbjct 63773 TTTGGCTGCCCCGGATGGATTCGAACCACCGAATGCCTGAGTCAGAGTCAGGTGCCTTAC 63832 Query 31312 CGCTTGGCGACGGCGCAA 31329 ||||||||||||| |||| Sbjct 63833 CGCTTGGCGACGGGGCAA 63850 >seq54 Length=176950 Score = 87.8 bits (96), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 31253 TTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA-- 31310 ||||||| | || ||||||||||||| || ||||||||||||||||||||||||||| Sbjct 38009 TTGGCTGGGGAGGAAGGATTCGAACCTTCGCATGCCGGAATCAAAATCCGGTGCCTTAAC 38068 Query 31311 CCGCTTGGCGAC 31322 | |||||||||| Sbjct 38069 CAGCTTGGCGAC 38080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138181452298338