Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028897.1 Length=49421 Score E Sequences producing significant alignments: (Bits) Value seq164 89.7 2e-13 seq2859 80.6 8e-11 >seq164 Length=17117 Score = 89.7 bits (98), Expect = 2e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 4136 GCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTCC 4195 ||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 441 GCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCC 500 Query 4196 TCCCTGGCCTGC 4207 |||||| ||| Sbjct 501 CTCCTGGCGTGC 512 >seq2859 Length=8594 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 4123 CTCCCGGGCT-TGGGCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTT 4181 ||||||| || | || | ||||||||| ||| |||||||||||||||||| |||| ||| Sbjct 3480 CTCCCGGTCTCTAGGGCGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTT 3539 Query 4182 GGAGGTTCGAGTCCTCCCTGGCCTGC 4207 | |||||||| |||| | | ||||| Sbjct 3540 GCAGGTTCGATTCCTGTCCGCCCTGC 3565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158006220826842