Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028899.1 Length=222888 Score E Sequences producing significant alignments: (Bits) Value seq39 134 2e-26 >seq39 Length=206917 Score = 134 bits (148), Expect = 2e-26 Identities = 201/281 (72%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 102572 CTCTGGAACCACATCGCCTGCACGTCGGACAACGACCTTATCGCCGATTCGCAGATCTTT 102631 ||| |||| ||| ||||| ||||| || || | |||| | |||||||| |||| ||||| Sbjct 78543 CTCGGGAATCACGTCGCCCGCACGCCGCACGATGACCGTGTCGCCGATGCGCACGTCTTT 78484 Query 102632 ACGCCGGATCTCGTCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCTACGAA 102691 || ||||| ||||||||||| ||||| || || |||| ||| ||| ||||| ||||| Sbjct 78483 GCGGCGGATTTCGTCTTCGTTGTGCAGGGTGGCATTGGTGACCGTCACGCCGCCCACGAA 78424 Query 102692 AACGGGCTCTAAGCGGCCCACTGGAGTAATGGCCCCCGTTCTACCTACTTGAACATCGAT 102751 || |||| | ||| | || || || ||||| ||||| | || || || || || || Sbjct 78423 CACCGGCTTGAGCCGGGCGACGGGGGTGATGGCGCCCGTGCGGCCCACCTGCACTTCAAT 78364 Query 102752 CGCCTCCAGCGTCGTTACAGCCTCTTCTGCGGGGAACTTCCATGCGATCATG---AAACG 102808 || |||||| || || ||||| ||||| ||||| |||| || | || || Sbjct 78363 GTCCAGCAGCGTGGTGGTGGCTTCTTCGGCGGGAAACTT--GTGCG-CCAGGGCAAAGCG 78307 Query 102809 CGGTGCTCTGGCTACGAAACCGACGATGTTCTGTG-CGGCA 102848 ||| || | || |||||||| | | ||||| | ||||| Sbjct 78306 CGGCGCGCGCGCCACGAAACCCAGCAGTTTCTGCGCCGGCA 78266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713021545948160