Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq769 98.7 1e-15 seq5011 93.3 6e-14 seq120 84.2 3e-11 >seq769 Length=5203 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 93079 ATTCCGCTTGATTACGATGTTGTCATGGAAGGTGCCCGCGACATGGTT-AATTCCAGACG 93137 || |||||||| ||| | | |||||||| || || |||||| || || ||| | Sbjct 3684 ATCCCGCTTGACTACAACATCGTCATGGACGGCGCGCGCGACTACGTCGAAAGCCAAGAG 3743 Query 93138 TCGTGGCGGATGGGGTGAATATCTCTGCTTCGGCGGCTTGCTTGAAGGTGAGTATGTCCC 93197 || ||||||||||||||||| || |||||||||||| ||||||| ||||| || || Sbjct 3744 -CGCGGCGGATGGGGTGAATACCTGTGCTTCGGCGGCCTGCTTGAGGGTGAAAGCGTACC 3802 Query 93198 TGATGAATTTTGGAATCATTACGAAATCGTAACGGGCGACACAGTCGAAGAAGATCATCG 93257 ||| || ||| || |||||| || || ||| | || ||| | ||||| || || Sbjct 3803 CAATGCCTTCTGGCCACACTACGAAGCAGTGACCGGCAAAACGGTCCAGGAAGACCACCG 3862 Query 93258 TCAATCCTTCTTTACGTGCTCGTGCT 93283 || ||||| || ||||| |||| Sbjct 3863 CGGCTCGTTCTTCACTTGCTCCTGCT 3888 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 92833 AAACCGGTAGGCATTGTCGATCCCTTCCTGAAGGGTCCGGTCTTCCCCGGTCAACGGTTT 92892 || ||||| ||||| || || || |||||| | || || || | | || |||| || Sbjct 3477 AATCCGGTCGGCATCGTGGACCCATTCCTGGAAGGCCCCGTATCGACGGGCGAACGATTC 3536 Query 92893 TGGTTGGTGGTCTATCCGCGACAGATTACGTCGCTTCGCCATGTGTGGGAGCATCCC 92949 ||| | ||||| |||||||| |||||||| ||||| || || || |||||||||||| Sbjct 3537 TGGCTCGTGGTGTATCCGCGCCAGATTACCTCGCTGCGTCACGTCTGGGAGCATCCC 3593 >seq5011 Length=2423 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 181971 AGTTTCTTGGTGGTCACGGCAGGAAAGCCCTTGGACAGGTCGAAACGTATCTGGCGACCA 182030 ||||||||||| |||| ||||||||| ||| ||||| ||||| || |||||| || Sbjct 862 AGTTTCTTGGTCGTCAGGGCAGGAAAACCCGCCGACAGATCGAATCGCATCTGGTAGCCG 921 Query 182031 AATACGGACCTTGTGCCAGTTCCGGTACGATCATCGGCATCGACGCCGTTTTCCAGCAC 182089 || ||||| | |||||| || |||||||| || || ||||||||| | || ||||| Sbjct 922 AAAACGGAACGTGTGCCTGTCCCGGTACGGTCGCCGCGGTCGACGCCGGTATCGAGCAC 980 >seq120 Length=487886 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 96755 TGCGGGGTAGTAGCAGTGGTTAGCTCGTCTGCCTCATAAGCAGAAGGTCATCAGTTCGAA 96814 |||||||| | |||||| | ||||||||| | ||||||| | ||||||||||||||||| Sbjct 383541 TGCGGGGTGG-AGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCAGTTCGAG 383599 Query 96815 TCTGATCCCCGCAACC 96830 |||| ||||||| ||| Sbjct 383600 TCTGGTCCCCGCTACC 383615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661268227517160