Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_028950.1 Length=223932 Score E Sequences producing significant alignments: (Bits) Value seq39 168 1e-36 >seq39 Length=206917 Score = 168 bits (186), Expect = 1e-36 Identities = 197/266 (74%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 99215 CCTACGATCTCAGGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGC 99274 || |||| ||| |||| ||| ||||| ||||| || ||||| ||| | ||||| || ||| Sbjct 78551 CCCACGACCTCGGGAATCACGTCGCCCGCACGCCGCACGATGACCGTGTCGCCGATGCGC 78492 Query 99275 AGACCTTTGCGATGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCG 99334 | ||||||| ||||||| |||||||| ||||| || || |||| ||| ||| ||| Sbjct 78491 ACGTCTTTGCGGCGGATTTCGTCTTCGTTGTGCAGGGTGGCATTGGTGACCGTCACGCCG 78432 Query 99335 CCCACGAAAACGGGCTTCAGGCGCCCCACGGGGGTGATGGCTCCCGTTCTACCTACTTGA 99394 |||||||| || ||||| || || | |||||||||||||| ||||| | || || || Sbjct 78431 CCCACGAACACCGGCTTGAGCCGGGCGACGGGGGTGATGGCGCCCGTGCGGCCCACCTGC 78372 Query 99395 ACTTCAATCGCCTCTAGCGTCGTTACAGCCTCTTCTGCAGGGAACTTCCACGCGATAGCA 99454 |||||||| || ||||| || || ||||| || || ||||| ||| | ||| Sbjct 78371 ACTTCAATGTCCAGCAGCGTGGTGGTGGCTTCTTCGGCGGGAAACTTGTGCGCCAGGGCA 78312 Query 99455 AAACGAGGGGCGCGAGACACATAACC 99480 || || || ||||| | ||| |||| Sbjct 78311 AAGCGCGGCGCGCGCGCCACGAAACC 78286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716361914692640