Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_029106.1 Length=62220 Score E Sequences producing significant alignments: (Bits) Value seq36 205 4e-48 >seq36 Length=362838 Score = 205 bits (226), Expect = 4e-48 Identities = 215/283 (76%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 44672 TGCACAGACCTTGCCCGGCGAGCGCGGCGCGGGTCTTCTCGTCGGCCTGGCACAGCACGT 44731 ||||||| || || ||| | ||| || ||| ||||||| ||| ||||| | || Sbjct 7738 TGCACAGGCCCTGGGCGGTCAACGCCGCCTTGGTGCGATCGTCGGTCTGACACAGGATGT 7797 Query 44732 CGATGGCGGCAGTTTCCAGGCGCTGCGAGCGCACCGGATCTTTCGTGGTAGCGCTGGCCT 44791 ||| ||||| |||||||| | ||||||| |||| || || || | ||| ||||| Sbjct 7798 CGACCGCGGCCGTTTCCAGCCTGCGCGAGCGATCCGGGTCCTTGGTCGACGCGGCGGCCT 7857 Query 44792 GCATGATGCGTTCGAAGTTGCGGCGCAGGTTGCAGTTCTTGTCCTCGACCGGCACGGCCA 44851 ||||| ||||||||||||||||||||||| |||| || |||| |||||||| | || | Sbjct 7858 GCATGGTGCGTTCGAAGTTGCGGCGCAGGCTGCATTTGGTGTCTTCGACCGGAAACGCGA 7917 Query 44852 CGTTGATGCCGAACGCGATGGCCGAACCACCGCCACCGCCGGACACCATGCAGCTGTCGG 44911 |||| ||||||||| | | | | ||||| ||||| || | ||||||||||||||||| | Sbjct 7918 CGTTCATGCCGAACCCTACGACTGAACCGCCGCCGCCCGCCGACACCATGCAGCTGTCTG 7977 Query 44912 GTGAGAACGAACCGTAGAAGCCCTGGCCGGCCACGGGCGGCGC 44954 |||||||| |||||||||| ||| || | | |||||||| Sbjct 7978 ACGAGAACGAGCCGTAGAAGCTCTGCGCGCCAATCGGCGGCGC 8020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198954156415707