Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq8774 93.3 4e-14 seq33 86.0 6e-12 seq1005 82.4 7e-11 >seq8774 Length=609 Score = 93.3 bits (102), Expect = 4e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 110991 GGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGT 111050 ||| ||||||| |||||||| ||||||||| || |||||||||||||||||||||||| Sbjct 516 GGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGG 457 Query 111051 CCAAGGCGC 111059 ||||||||| Sbjct 456 CCAAGGCGC 448 >seq33 Length=92283 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 110980 TGGACTGAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACT 111039 ||| ||| | ||| ||||||| |||||||| ||||||||| || |||||||||||||| Sbjct 63211 TGGCCTGGGGCGGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACT 63270 Query 111040 GAGCTACCAGTCCAA 111054 |||||||||| |||| Sbjct 63271 GAGCTACCAGGCCAA 63285 >seq1005 Length=32024 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 110986 GAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTA 111045 |||| ||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct 3945 GAGACGGAATCGAACCGCCGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTA 3886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484343869188840