Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5011 114 1e-20 seq250 98.7 8e-16 seq1432 82.4 6e-11 >seq5011 Length=2423 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 |||| || ||||| ||||| ||||| || || || ||||| | || || ||||| || Sbjct 385 TAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCTGCAGACCCGTGACCTGC 444 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 |||| |||| || || || | ||| ||||| || || ||||| ||||| || Sbjct 445 GCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACGGCACGCCGAGAAAGATA 504 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 29848 || | || | ||||||||||||||| || |||| ||||||| |||||| ||||| || Sbjct 505 TCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGGCCACGTAGAACTGGAAC 564 Query 29849 ATGGCA-TGGCACGGAGGAAGGGCCAT 29874 | |||| ||||| || || || ||||| Sbjct 565 A-GGCAGTGGCAGGGCGGCAGCGCCAT 590 >seq250 Length=59172 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 29713 || ||||||| ||| | || || || |||||||| || || || || ||| | Sbjct 46320 TCAACGTGGTTGGAGTACAGATGCGCGTCGCCCAGGGTATGCACGAAGTCGCCCACGCCC 46379 Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||||||| | || |||| ||||| ||||| || | ||||||||||||||| || ||| Sbjct 46380 AGCCCGGTGGCCTGCGCCACCATGTGGGTGAGCAGTGCGTAGCTGGCGATGTTGAACGGC 46439 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||| || | |||||| | |||||| ||||| ||||| | Sbjct 46440 ACGCCCAGGAAGATGTCGCCGCTGCGCTGGTACAACTGGCAGCTGAGCTTGCCGTCCACC 46499 Query 29834 ACGTAAAACTGACACATGGCATGGCACGG 29862 ||||| ||||| ||| | ||||| || Sbjct 46500 ACGTAGAACTGGAACAGGTTGTGGCAGGG 46528 >seq1432 Length=12607 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 29752 GTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGC 29809 |||| ||||||||| || ||||| ||||| |||||| | ||| | ||| || ||| Sbjct 8896 GTAGGAGGCGATGTTGAACGGCACACCGAGGAACATGTCGGCGCTG--CGCTGATACAGC 8839 Query 29810 TGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGG 29869 || |||||||||| |||||| ||||| ||||| ||| || || || || | || Sbjct 8838 TGACACGAGAGCTTGCCGTCGGCGACGTAGAACTGGAACAGCGCGTGACAGGGCGCGAGC 8779 Query 29870 GCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGA 29912 |||||| | ||| |||||||||||| ||||||||| Sbjct 8778 GCCATGTCCGGGATGTCGGCCGGGTTCCAGGCAGACACGATGA 8736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406112080172722