Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq19 129 5e-25 >seq19 Length=879724 Score = 129 bits (142), Expect = 5e-25 Identities = 557/871 (64%), Gaps = 20/871 (2%) Strand=Plus/Minus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 |||||| || || || || || || |||||||| |||||||||| | || || | Sbjct 584134 TTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCAT 584075 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTT--TTTCACACTTTAGAGCTAC 4372 |||||||||||||||||||| || || | || || || | | || | | || | Sbjct 584074 CTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTC--CTGC 584017 Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAA 4431 | || ||| ||| || ||||| || |||||||| ||| |||| ||| || || || | Sbjct 584016 A-GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCA-TTCATCCCGA 583959 Query 4432 TTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491 | | || || | || | ||| | ||| || | ||| || ||| || || || Sbjct 583958 TCAGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGA 583899 Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAA-CAC 4550 | || | | | || | |||||||| | || || | || | || Sbjct 583898 TAATTCCATGAACGACTTCCTGGCTCAGTTTATTTT-TGAGCATTTTATAAAGCAGGCAG 583840 Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 ||||| |||||||||| || || |||||| ||||| || ||| ||| |||| || Sbjct 583839 GCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCT 583780 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||| | ||||| ||||| | ||| || || | || ||| ||||| ||| Sbjct 583779 GGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATG 583720 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT--GTCTTTAA 4728 ||||| || ||||| || || || || || | || ||| | | | || Sbjct 583719 CCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAA--------TTTCCGCCCTCAA 583668 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| |||||||| | ||||||||||| || || |||| || | || || | | Sbjct 583667 TCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGA 583608 Query 4789 ATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTT 4848 | | | |||||| || |||| |||||| || || || || || ||| ||| Sbjct 583607 ACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTT 583548 Query 4849 CAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTT 4908 |||| || || ||||| || ||||| || || ||||| || | ||||| | | | Sbjct 583547 CAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCT 583488 Query 4909 GAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAA 4968 | |||||| | || | || | | |||||| ||||| || |||||||| || |||| Sbjct 583487 GTACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAA 583428 Query 4969 AAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGG 5028 |||| || | | |||||| || || | | ||| | | || | || | |||||| Sbjct 583427 AAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCT 583368 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088 | || | || | |||| ||||||| | ||||| || ||||| || || | Sbjct 583367 TCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTAT 583308 Query 5089 ACATAGACCAAATATCAGGATACTGAATCGG 5119 |||| ||| || ||||| || | ||| || Sbjct 583307 ACATTTCCCAGATTTCAGGGTATTTAATAGG 583277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426995851403891