Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_030916.1 Length=56212 Score E Sequences producing significant alignments: (Bits) Value seq2504 89.7 2e-13 >seq2504 Length=31563 Score = 89.7 bits (98), Expect = 2e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 46506 CTCTGC-CGCGAGGTCGACCCGGACCTGTGGTTCCCCGAGCGGGGCGGATCGACCCGCGA 46564 |||||| ||| || ||||||||| || ||||||||| ||| |||||||| | || Sbjct 30819 CTCTGCTCGC-AGACCGACCCGGAGGCGTTCTTCCCCGAGAAGGGTGGATCGACGAGGGA 30877 Query 46565 CGCGAAGCGGATCTGCAGGCGCTGCCCCGTCCAGGAGAAGTGCCTGCAGCAGGCACTCGA 46624 ||| ||||||||||||| | ||| ||||| | | |||||||| | | || ||| | Sbjct 30878 CGCCAAGCGGATCTGCACGTCGTGCGACGTCCGCGGGGAGTGCCTGGAATACGCTCTCAA 30937 Query 46625 CGCGGGGGAGCGGTTCGGAGTGTGGGGCGGCGTCAGCGAACGCGAACGCCG 46675 | | ||||||||||| | ||||| ||| | ||| ||||| ||||| Sbjct 30938 CAACGATGAGCGGTTCGGCATCTGGGGTGGCCTGTCCGAGCGCGAGCGCCG 30988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179734755861876