Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq5011 113 6e-20 seq250 93.3 6e-14 seq36 87.8 3e-12 >seq5011 Length=2423 Score = 113 bits (124), Expect = 6e-20 Identities = 177/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262 |||||||| || || || || | || ||||||| |||||||||| ||| ||||| Sbjct 953 GACCGTACCGGGACAGGCACACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTGTCG 894 Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAGCG-CTGTCACATGCGTTCGATTATTCACGAACT 99321 | || ||||| | ||||| ||| ||| || | || || || ||||| || Sbjct 893 GCGGGTTTTCCTGCCCTGACGACCAAGAAACTG-CATCTCAAATCCATCATCCACGAGCT 835 Query 99322 GCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTAT 99381 ||||||||||||||||||||| || || || ||| | || || || || || || || Sbjct 834 GCTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGACGAT 775 Query 99382 TTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCG 99441 ||||| |||||| || | | ||||| ||||| ||||| || || | |||||||| Sbjct 774 CTGGGATGAATGGGCCGACGAGAACGGCGATCTCGGGCCGGTCTATGGCTATCAGTGGCG 715 Query 99442 GTCTTGGCCTG 99452 || ||||||| Sbjct 714 CTCCTGGCCTG 704 >seq250 Length=59172 Score = 93.3 bits (102), Expect = 6e-14 Identities = 87/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 99242 CAGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACAT 99300 |||||||| ||||| ||| || ||||| |||||||| || || ||| |||| ||| | Sbjct 46864 CAGATGCGCTTCAACCTGGGCGACGGCTTCCCGCTGGTCACCACCAAGAAGCTG-CACCT 46806 Query 99301 GCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAA 99348 ||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct 46805 GCGGTCGATCATCCATGAGCTGCTGTGGTTCCTGAAGGGCGACACCAA 46758 >seq36 Length=362838 Score = 87.8 bits (96), Expect = 3e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 88447 GAGATAGCTCCCTTCGCCTATATGCGTGGCCGCAACTTCGAGAACGCGGTCGTTATCTTA 88506 ||||| || || | ||||||||||||||||||| | | | |||| |||| ||| | Sbjct 350185 GAGATCGCCCCGCTGGCCTATATGCGTGGCCGCACCCTGAACCACGCCTTCGTCATCCTG 350244 Query 88507 GATGAAGCTCAGAACACCACTGCTCAGCAGATGAAGCTCTTCCTGACCCGTATCGG 88562 || || || ||||||||||| | | ||||||||| | ||||||||||| ||||| Sbjct 350245 GACGAGGCGCAGAACACCACGCCGGAACAGATGAAGATGTTCCTGACCCGCATCGG 350300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716371513453400