Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq1055 87.8 2e-12 seq3600 86.0 7e-12 seq155 84.2 2e-11 >seq1055 Length=31167 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||| ||||| ||||| ||||||||| |||| | ||||||||||| | |||||||| Sbjct 21304 AATGGCGCACCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTAT 21363 Query 66461 CCAGCTGAGCTAAGAGTGCATTA 66483 |||||||||||| | | || ||| Sbjct 21364 CCAGCTGAGCTACGGGCGCCTTA 21386 >seq3600 Length=14086 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 66402 ATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATC 66461 ||||| ||||| |||||||||||||||||||||| | ||| | ||| | |||||||| Sbjct 7747 ATGGCGCACCCGACAGGATTCGAACCTGTGACCTCTGCCTTCGGAGGGCAGCGCTCTATC 7806 Query 66462 CAGCTGAGCTAAGAGTGCAT 66481 ||||||||||| | |||||| Sbjct 7807 CAGCTGAGCTACGGGTGCAT 7826 >seq155 Length=27654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 66402 ATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATC 66461 |||| | ||| |||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct 10295 ATGGTGCGCCCGACAGGAATCGAACCTGTAACCGCCGGCTTAGAAGGCCGGTGCTCTATC 10354 Query 66462 CAGCTGAGCTA 66472 ||| ||||||| Sbjct 10355 CAGTTGAGCTA 10365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522047801454120