Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq3870 84.2 2e-11 >seq3870 Length=345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 199/298 (67%), Gaps = 12/298 (4%) Strand=Plus/Minus Query 41497 ATGTCAGGATACATTCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAGTTC 41556 || || |||||||| | |||||||||||||| || || |||||||| || || |||||| Sbjct 301 ATATCCGGATACATGCGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTTC 242 Query 41557 GGATCGTTTTTATAAAGATTAACACCTTCTTCAA---CAAACATAACAAGCTTAGGAAAA 41613 |||||| ||| | | | || | ||| || || ||||| || || || || || Sbjct 241 GGATCGCCTTTTTTATGGTTCAGACCATCGCGAATCGCAAAC---ACCAGTTTCGGGAAC 185 Query 41614 ATAGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGA 41673 | | |||| | | | ||| || ||| ||||| || ||| || | || |||| Sbjct 184 ACCGCAGTTTTACGGTTTTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGA 125 Query 41674 ATCATTCG---TTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGCGTT 41730 |||| || ||| |||| || ||| |||||| || |||||||| ||||| Sbjct 124 ATCAGGCGCGATTC---CCAGCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTC 68 Query 41731 TGCCCGTTTGAACTAAAAAGAGTATTTACTTCATATTCATAAGCTTGGAATGCATCGT 41788 || ||||| | | || || |||||||| || || | ||||| ||||||| Sbjct 67 TGACCGTTGGCGGTGTGCAGGGTGTTTACTTCGTACTCCAGCGACTGGAAGGCATCGT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546323067416160