Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq5011 100 4e-16 seq250 89.7 8e-13 >seq5011 Length=2423 Score = 100 bits (110), Expect = 4e-16 Identities = 175/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 99522 GGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTG 99581 ||||||||||| || || || || || | || || | || ||||| || || || Sbjct 956 GGCGACCGTACCGGGACAGGCACACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTG 897 Query 99582 GCTGAAGGTTTTCCTCTGGTCACTACTAAGCG-CTGTCACCTCCGTTCTATTATTCATGA 99640 | | ||||||||| | || || ||| ||| || ||| || || || || || Sbjct 896 TCGGCGGGTTTTCCTGCCCTGACGACCAAGAAACTG-CATCTCAAATCCATCATCCACGA 838 Query 99641 ACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCAC 99700 || || |||||||||||||| || || || | | || || || || |||||||| || Sbjct 837 GCTGCTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGAC 778 Query 99701 TATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTG 99760 |||||| |||| |||| |||||||||| || | || ||||| || || | ||||| Sbjct 777 GATCTGGGATGAATGGGCCGACGAGAACGGCGATCTCGGGCCGGTCTATGGCTATCAGTG 718 Query 99761 GCGGTCTTGGCC 99772 ||| || ||||| Sbjct 717 GCGCTCCTGGCC 706 >seq250 Length=59172 Score = 89.7 bits (98), Expect = 8e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 99564 CAAATGCGTTTTAATTTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGC-GCTGTCACCT 99622 || ||||| || || ||| || || || || |||||||| || ||| |||| ||||| Sbjct 46864 CAGATGCGCTTCAACCTGGGCGACGGCTTCCCGCTGGTCACCACCAAGAAGCTG-CACCT 46806 Query 99623 CCGTTCTATTATTCATGAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCT 99682 || || || || ||||| || || ||||||||||| || || ||||| | | ||||| Sbjct 46805 GCGGTCGATCATCCATGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCT 46746 Query 99683 GAAAGATAACGGCGTCACTATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACC 99742 | || ||| || |||||| | ||||||| | | ||||| ||| | || || Sbjct 46745 CACCGACAACCAGGTGCGCATCTGGGACGAGTGGGCCGATGCCAACGGCGACCTGGGTCC 46686 Query 99743 GGTATACGGAAAGCAGTGGCG 99763 | | ||||| ||||| ||||| Sbjct 46685 GATCTACGGCAAGCAATGGCG 46665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734180414250120