Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq3870 91.5 2e-13 seq2070 82.4 8e-11 >seq3870 Length=345 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/272 (68%), Gaps = 12/272 (4%) Strand=Plus/Plus Query 78762 GAAGTAAATACACTTTTCAGCTCTAATGGACAGACTCCTTTTGTAACAATTACATTTGGT 78821 |||||||| || || || | | || || ||||| || |||||||| || |||||| Sbjct 36 GAAGTAAACACCCTGCACACCGCCAACGGTCAGACGCCGTTTGTAACCTTTGGTTTTGGT 95 Query 78822 ACGGGAACTGACTGGACTGAA---CGAATGATTCAGAAAGCAATTCTGAAAAATCGTATT 78878 ||| || |||| ||| || |||||||| || | || ||| || ||||| Sbjct 96 CTGGGCACCAGCTGG---GAATCGCGCCTGATTCAGGAATCGATCCTGCGTAACCGTATC 152 Query 78879 AAAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTTG---TT 78935 ||| || ||| | | | |||| | | ||||| || || || ||||| || Sbjct 153 GCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCCGAAACTGGT---GTTTGCGATT 209 Query 78936 GAAGAAGGTGTTAATCTTTACAAAGACGATCCGAACTATGATATTAAGCAGCTTGCTCTA 78995 || ||| | || | | | |||| |||||||||||| || || || ||||| || || Sbjct 210 CGCGATGGTCTGAACCATAAAAAAGGCGATCCGAACTACGACATCAAACAGCTGGCGCTG 269 Query 78996 GAGTGCGCAAGCAAAAGAATGTATCCTGATAT 79027 |||||||||||||| | |||||||| ||||| Sbjct 270 GAGTGCGCAAGCAAGCGCATGTATCCGGATAT 301 >seq2070 Length=16073 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1046 GCGGCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGC 1105 ||| ||||| ||||||||||||| | | ||||||||||| | |||||||||||||||||| Sbjct 3130 GCGACAGGAGTTGAACCTGCGACCTCCCGCTCCCAAAGCGGGCGCTCTACCAAACTGAGC 3189 Query 1106 TAC 1108 ||| Sbjct 3190 TAC 3192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546265474851600