Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 4e-14 seq9125 91.5 2e-13 seq3559 89.7 5e-13 seq3096 87.8 2e-12 seq6423 84.2 2e-11 seq340 84.2 2e-11 seq2070 82.4 8e-11 seq375 82.4 8e-11 seq47 82.4 8e-11 >seq29 Length=97445 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 95714 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 95773 ||||||||||| ||||| ||| |||||||| ||| ||||| ||| ||||||||||||| Sbjct 16047 ACGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGA 16106 Query 95774 ATCCTGTCACCCCGAC 95789 |||||||| ||||||| Sbjct 16107 ATCCTGTCTCCCCGAC 16122 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 95715 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 95774 |||||||||| ||||| ||| |||||||| ||| ||||| ||| |||||||||||||| Sbjct 15833 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 15892 Query 95775 TCCTGTCACCCCGAC 95789 ||||||| ||||||| Sbjct 15893 TCCTGTCTCCCCGAC 15907 >seq9125 Length=594 Score = 91.5 bits (100), Expect = 2e-13 Identities = 206/305 (68%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 156565 TGCACGCCAAGCTGCCGCAGCTGTTCGGCCTGCTGCAGCGCAAGGGCCTGATCGAGGACC 156624 |||| | |||||| ||||| ||| |||||||| |||||||| || || | Sbjct 4 TGCAGGACAAGCTCGGAAAGCTGCACGGGCTGCTGCAACGCAAGGGATACGCGGATGATC 63 Query 156625 CGCAGATTCTCATCGCGGCCACCGGGGATGCCAACAGTGACCTGGTGCCGCTGCAGGTCG 156684 |||||||||| ||| | | ||| || ||| | || | |||||| || || |||| Sbjct 64 CGCAGATTCTGTTCGGTGGTATCGGCGACGCCGATTCCGATCAGGTGCCACTACAAGTCG 123 Query 156685 GCCAGTTCGAGTCCGACAACCGCATCGACG-CCATGATCGAGGCCATGTACCTCGAAGGG 156743 ||||||||||||| | ||| || |||| || ||| | |||| | |||||| || Sbjct 124 GCCAGTTCGAGTCGGGTAACGCGATGGACGAGCAGCTTCG-GACCATCTTCCTCGAGGGC 182 Query 156744 TGCGGTGGCGGGCAAGCGCACGAGACCTACGAGCTTGCGGCCTACTTCCTGGCCCGGCAC 156803 |||||| || || | || | ||| || | || || || ||| |||| || ||| Sbjct 183 AACGGTGGTGGACAGAAGTCGGAAAGCTATGAATTGGCAGCATATTTCATGGCGCGCCAC 242 Query 156804 ACC--TACCTGGAGCCGTGGCACAAGCAGGGTCGCAAGGGCTATGCCATCTTCATCGGCG 156861 ||| ||| ||| | ||| | |||| || | || ||||| | || ||||||||| Sbjct 243 ACCAGTAC--GGATGCCTGGGAGAAGCGCGGAAGGAAAGGCTACCTCTTCATCATCGGCG 300 Query 156862 ACGAG 156866 ||||| Sbjct 301 ACGAG 305 >seq3559 Length=12351 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 120467 GGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 120526 |||||||||||||| || | | || ||| ||||| | |||| ||| |||||| Sbjct 3516 GGGCCGGGCCGTGGCTCGGGTGCCGGGTCGATGGTCGCGTACGCGATGAAGATCACCGAC 3575 Query 120527 ATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGAC 120586 |||| || || | ||| |||||| |||||||||||| ||||||| || || | | Sbjct 3576 CTCGACCCACTCGAACACGGCCTGATCTTCGAGCGCTTCCTCAACCCCGACCGTGTCTCC 3635 Query 120587 TTTCCCGACATCGACGTCGACTTC 120610 | |||||| |||||||||||||| Sbjct 3636 ATGCCCGACTTCGACGTCGACTTC 3659 >seq3096 Length=9392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 95714 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 95773 ||||||||| | ||| |||| || |||||| ||| ||||| |||| ||||||||||| | Sbjct 5388 ACGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAA 5329 Query 95774 ATCCTGTCACCCCGAC 95789 |||||||||||||||| Sbjct 5328 ATCCTGTCACCCCGAC 5313 >seq6423 Length=604 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 120466 CGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 120525 |||||| ||||||||||| || | || ||| |||| |||||| ||||| |||||| Sbjct 128 CGGGCCCGGCCGTGGATCGGCTGCCGGTTCGTTGGTGGCCTACGCGATGGGTATCACCAA 69 Query 120526 GATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCG 120579 ||||| || ||| ||||| || |||||||||| ||| ||||||| || || Sbjct 68 CATCGACCCCATCCCGTACGGGTTGCTGTTCGAGCGATTCCTCAACCCCGAGCG 15 >seq340 Length=55687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 120466 CGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 120525 ||| || |||||||| |||| | ||||||||||| ||| | || |||||| Sbjct 6316 CGGCCCCGGCCGTGGTTCCGGTGCCGGCTCGCTGGTGGCCTGGGCGCTGCAGATCACCGA 6375 Query 120526 GATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGC--CCC 120583 |||| |||||| |||| ||||| |||||||||| ||| ||||||| || ||| | Sbjct 6376 TCTCGACCCGATCCCGTACAACCTGCTGTTCGAGCGGTTCCTCAACCCCGAACGCGTGTC 6435 Query 120584 GACTTTCCCGACATCGACGTCGACTTC 120610 || | |||||| ||||| |||||||| Sbjct 6436 GA--TGCCCGACTTCGACATCGACTTC 6460 >seq2070 Length=16073 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 95712 CCACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTC 95771 || ||||| |||| ||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct 3201 CCCCGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTC 3142 Query 95772 GAATCCTGTCACCCCGACTCAGC 95794 | ||||||| ||||||| |||| Sbjct 3141 AACTCCTGTCGCCCCGACACAGC 3119 >seq375 Length=82088 Score = 82.4 bits (90), Expect = 8e-11 Identities = 112/155 (72%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 120456 CGTGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGG 120515 |||||| ||| || || ||||| || |||| || || |||||||| | |||| ||| Sbjct 20614 CGTGCCCGTG-GGCCCCGGCCGGGGTTCCGGCGCCGGTTCGCTGGTGGCGTACGCGCTGG 20556 Query 120516 GCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGG 120575 |||| ||| | || |||||| |||||| || |||||||||||||| | || || | Sbjct 20555 GCATTACCGACCTGGACCCGATCCGCTACGACTTGCTGTTCGAGCGCTTCCTGAATCCCG 20496 Query 120576 ATCGCCCCGACTTTCCCGACATCGACGTCGACTTC 120610 | || | | | |||||| |||| |||||||| Sbjct 20495 AGCGGGTCTCCATGCCCGACTTCGATATCGACTTC 20461 >seq47 Length=198233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 100839 TCGATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGAT 100898 || ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||| | | Sbjct 183132 TCAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTT 183191 Query 100899 CGTAACCCGTTCTTCGCTCT 100918 || | | ||| |||||||| Sbjct 183192 CGAATCTCGTCTTTCGCTCT 183211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514957516839400