Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq3870 84.2 2e-11 >seq3870 Length=345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 183/270 (68%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 159435 GAAGTAAATACACTTTTCAGCTCTAATGGACAAACGCCTTTTGTAACAATTACATTTGGT 159494 |||||||| || || || | | || || || ||||| |||||||| || |||||| Sbjct 36 GAAGTAAACACCCTGCACACCGCCAACGGTCAGACGCCGTTTGTAACCTTTGGTTTTGGT 95 Query 159495 ACAGGAACTGACTGGACTGAA---CGAATGATTCAGAAAGCAATTCTGAAAAATCGTATT 159551 || || |||| ||| || |||||||| || | || ||| || ||||| Sbjct 96 CTGGGCACCAGCTGG---GAATCGCGCCTGATTCAGGAATCGATCCTGCGTAACCGTATC 152 Query 159552 AAAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTCG-TTGA 159610 ||| || ||| | | | |||| | | ||||| || || || | | || || Sbjct 153 GCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCCGAAACTGGTGTT-TGCGATTCG 211 Query 159611 AGAAGGTGTTAATCTTTATAAAGACGATCCGAACTATGATATTAAACAGCTTGCTTTAGA 159670 || ||| | || | | | |||| |||||||||||| || || |||||||| || | || Sbjct 212 CGATGGTCTGAACCATAAAAAAGGCGATCCGAACTACGACATCAAACAGCTGGCGCTGGA 271 Query 159671 GTGCGCAAGCAAAAGAATGTATCCTGATAT 159700 |||||||||||| | |||||||| ||||| Sbjct 272 GTGCGCAAGCAAGCGCATGTATCCGGATAT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542589149480520