Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq2070 98.7 1e-15 seq724 89.7 6e-13 seq155 82.4 9e-11 seq77 82.4 9e-11 seq56 82.4 9e-11 >seq2070 Length=16073 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 167483 CGGGGCGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAA 167542 |||||||||||||||||||||||||| | ||||||||||||| | || || |||||||| Sbjct 3198 CGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAC 3139 Query 167543 TCCTATCGCCCCGA 167556 |||| ||||||||| Sbjct 3138 TCCTGTCGCCCCGA 3125 >seq724 Length=120926 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19746 CATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCG 19805 |||||| | |||||||||| |||||||| | ||||||||||||| | |||||||||||| Sbjct 35253 CATTCCGCGATAGCTCAGTTGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 35312 Query 19806 AGCCCAGGTGGAGGAGC 19822 || |||||| | ||||| Sbjct 35313 AGTCCAGGTCGTGGAGC 35329 >seq155 Length=27654 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165862 GCTTAACTCAGCGGTAGAGTGTCTCCTTTACACGGAGGGTGTCGGCGGTTCGAATCCGTC 165921 ||||| ||||||||||||| ||||||||||||||||| | ||||| |||||||| || || Sbjct 867 GCTTAGCTCAGCGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGGGGTTCGAAACCCTC 808 Query 165922 AGC 165924 ||| Sbjct 807 AGC 805 >seq77 Length=324652 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||| Sbjct 157515 TTCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAG 157456 Query 19808 CCCAGGTGGAGGAGC 19822 ||||| | | ||||| Sbjct 157455 CCCAGCTCGGGGAGC 157441 >seq56 Length=468132 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||| Sbjct 230672 TTCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAG 230731 Query 19808 CCCAGGTGGAGGAGC 19822 ||||| | | ||||| Sbjct 230732 CCCAGCTCGGGGAGC 230746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621990098487240