Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq1940 147 7e-31 >seq1940 Length=14353 Score = 147 bits (162), Expect = 7e-31 Identities = 246/348 (71%), Gaps = 6/348 (2%) Strand=Plus/Minus Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957 |||||||| ||||| ||||| ||| | |||||||| ||| ||| || ||||| || Sbjct 12937 ATGGCCGGCGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCGAGCTGCGC 12878 Query 30958 TTCACGCCGT-CTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTT 31016 | ||||| | | ||| || | || ||||||||||| ||||| || || || | || Sbjct 12877 TACACGCAGAACGGGCTGC-CGGTGGCGAACTTCACCATCGCATCGACGCCTCGGAACTT 12819 Query 31017 CGATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGCTGTCTG 31076 ||| || | || |||||||| |||||||| |||| ||||| || || | ||||| Sbjct 12818 CGACCGTGCCGCGAATGAGTGGAAGGACGGCGATGCGCTGTTCCTCCGTGCATCCGTCTG 12759 Query 31077 GCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATCTGCGT 31136 ||||||| || ||| | || || | || || |||||||||| |||||| ||| Sbjct 12758 GCGCGAGTTCGCCGAGCACGTGGCGGGTTCGTTGACGAAGGGCATGCGCGTCATC-GCGC 12700 Query 31137 CGGG-CGTCTGAAGTC-GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCATC 31194 ||| |||||| ||| |||| |||| || |||||| | ||||||| | ||| Sbjct 12699 AGGGCCGTCTG-CGTCAGCGCTCCTACCAGGACCGCGAGGGCAACCAGCGCACCGCGATC 12641 Query 31195 GAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCGATGGGCGTCTGCG 31242 ||||| || |||||| |||||||| ||||| || | ||| | ||| Sbjct 12640 GAGCTGGAGGTCGACGAGATCGGCCCCTCGCTCCGGTACGCGACCGCG 12593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163986287382648