Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq504 82.4 6e-11 >seq504 Length=56252 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/136 (74%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 107558 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCTGATGCGT 107617 ||||||||| || |||||||| || | ||||| ||| || || |||| || ||| Sbjct 35833 GTTGCCCAAGTCTCCGACGTGGCGGACGTCGGCGGTGGGGGCTCCGTGCTCCT--TGCCG 35890 Query 107618 A--GGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTGC 107675 | || || ||||| |||| || ||| |||| || ||| | ||||||||||| | ||| Sbjct 35891 AAGGGGTTGAAGTGGGCGCCGGCGGACATGCAGCCGTTGGTGGTGTCGCCAAACTGGTGG 35950 Query 107676 ACGTGAAAACCGTGCA 107691 ||||| || ||||||| Sbjct 35951 ACGTGGAATCCGTGCA 35966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421758110710552