Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq19 114 1e-20 >seq19 Length=879724 Score = 114 bits (126), Expect = 1e-20 Identities = 528/832 (63%), Gaps = 12/832 (1%) Strand=Plus/Minus Query 23208 AACACCCA--TTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCT 23265 ||||||| |||||||||| || || |||||| | || || ||||| || || || | Sbjct 584145 AACACCCCGCTTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGC 584086 Query 23266 AATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGAT 23325 | || || | |||||||||||||| ||||| | | || ||||| || | Sbjct 584085 AGGGAGATCATCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCC 584026 Query 23326 AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTT 23385 | ||||| | || ||||| ||||| |||||||| || |||||| | || Sbjct 584025 AGTTCCTGCAGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTC 583966 Query 23386 ATACCTATTAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACAGC 23444 || || || || || || | ||||| | ||| || | ||||| || || || Sbjct 583965 ATCCCGATCAGGGCAACCGGCAAGGCATC-TGTAATAAATTCCTTTTCGATTTCTACCGC 583907 Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504 || || ||| | || ||||| | || || || ||| | ||| | | Sbjct 583906 GTCGCGGATAATTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAG 583847 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 | || ||||| |||||||| | || ||||| || |||||| |||||| ||| || Sbjct 583846 CAGGCAGGCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGT 583787 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA-A 23623 || |||||||| | |||| |||||| | ||| || || | | || | | ||| | | Sbjct 583786 TAGCCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGA 583728 Query 23624 AGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAAT 23683 ||||||| || || || || || || ||||| | |||| |||| || | | | Sbjct 583727 AGAAAATGCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA- 583669 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 ||||| || ||| | || || |||||||| || || || | | Sbjct 583668 -----ATCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGG 583614 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTAT 23803 | | || || |||||||||| |||| | ||||| ||||| || || | || Sbjct 583613 CATGGAACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCAT 583554 Query 23804 ACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863 | ||||||| || || ||||| || ||||| || ||||||||||| | ||||| | Sbjct 583553 AGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGG 583494 Query 23864 ACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAG 23923 | || || || | | || | || | ||||| || ||||| || ||||| | Sbjct 583493 GAAGCTGTACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTG 583434 Query 23924 CAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCC 23983 ||||||| |||||||| | || || ||||| | || | || ||| || | || Sbjct 583433 CAGCAAAAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCC 583374 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 | | || || | || | |||| ||| ||| | ||||| |||||||| Sbjct 583373 AGTGCTTCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGC 583322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521420682417800