Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq40 4706 0.0 seq1687 248 3e-61 seq9861 152 2e-32 seq3840 141 4e-29 seq501 111 6e-20 >seq40 Length=14228 Score = 4706 bits (5218), Expect = 0.0 Identities = 2735/2816 (97%), Gaps = 2/2816 (0%) Strand=Plus/Plus Query 4859 TAATTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCCTCCTGGC 4918 || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 4083 TAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCTTGCTGGC 4142 Query 4919 AACTTGCACAAGTCCGACAACCCTGAACGGCCAGGCGTCTTCGCTCATCTATGGGATCGC 4978 |||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct 4143 AACTGGCACAAGTCCGACAACCCTGAACGGCCAGTCGTCTTCGTTCATCTATCGGATCGC 4202 Query 4979 CACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTG 5038 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4203 CACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTG 4262 Query 5039 CTGTGTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATGAGGTCTGCCATCTTTC 5098 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 4263 CTGTGTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATTATGTCTGCCATCTTTC 4322 Query 5099 ATTAATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAG 5158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4323 ATTAATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAG 4382 Query 5159 CCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCACCGTTCCTTAAAGACGCCGTTTAA 5218 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4383 CCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCACCGTTCCTTAAAGACGCCGTTCAA 4442 Query 5219 CATGCCGATCGCCAGACTTAAATGAGTCGGTGTGAATCCCATTAGCGTTACCGTTTCGCG 5278 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 4443 CATGCCGATCGCCAGGCTTAAATGAGTCGGTGTGAATCCCATCAGCGTTACCGTTTCGCG 4502 Query 5279 GTGCTTCTTCAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACTGCTGTCT 5338 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4503 GTGCTTCTTTAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACTGCTGTCT 4562 Query 5339 GGCTTTTTTGATTTCAGAATTAGCCTGACGGGCAATGCTGCGAAGGGCGTTTTCCTGCTG 5398 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 4563 GGCTTTTTTGATTTCAGAATTAGCCTGACGGGCAATGCTGCGAAGGGCGTTTTCTTGCTG 4622 Query 5399 AGGTGTCATTGAACAAGTCCCATGTCGGCAAGCATAAGCACACAGAATATGAAGCCTGCT 5458 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 4623 AGGTGTCATTGAACAAGCCCCATGTCGGCAAGCATAAGCACACAGAATATGAAGCCCGCT 4682 Query 5459 GCCAGAAAAATGCATTCTGTTGTTGTCATGCCGGGTCTCTCTCGTTTGCTTCTGCTTTCG 5518 ||||||||||||||||| || |||||||| || |||||||||| | |||||||||||||| Sbjct 4683 GCCAGAAAAATGCATTCAGTGGTTGTCATACCTGGTCTCTCTCATCTGCTTCTGCTTTCG 4742 Query 5519 CCGCCATCATTTCCAGCTTTTGTGAAAGGGATGTGGCTAACGTATGAAATTCTTCGTCTG 5578 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4743 CCACCATCATTTCCAGCTTTTGTGAAAGGGATGCGGCTAACGTATGAAATTCTTCGTCTG 4802 Query 5579 TTTCTACTGGTATTGGCACAAACCTGACTCCAATTTGAGCGAGGCTATGTGCCATCTCGA 5638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4803 TTTCTACTGGTATTGGCACAAACCTGACTCCAATTTGAGCGAGGCTATGTGCCATCTCGA 4862 Query 5639 TACTCGTTCTTAACTCAACGGGAGATGCTTTGTGCATACAGCTCCCCGTTTATTATTTAT 5698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4863 TACTCGTTCTTAACTCAACGGGAGATGCTTTGTGCATACAGCTCCCCGTTTATTATTTAT 4922 Query 5699 CTCCTCAGCCAGCCGCTGTGCTTTCAGGGGATTTCTGATAACAGAAAGGCCGGGAAATAC 5758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4923 CTCCTCAGCCAGCCGCTGTGCTTTCAGGGGATTTCTGATAACAGAAAGGCCGGGAAATAC 4982 Query 5759 CCAGCCTCGCTTTGTAACGGAGTAGACGAAAGTGATCGCACCTACCCGGATATTATCGTG 5818 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 4983 CCAGCCTCGCTTTGTAATGGAGTAGACGAAAGTGATCGCGCCTACCCGGATATTATCGTG 5042 Query 5819 AGGATGCTTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCC 5878 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5043 AGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCC 5102 Query 5879 ATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGC 5938 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 5103 ATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTAATTTTCATCCCGC 5162 Query 5939 TCAACCACGACATAATGCAGGCCTTCACGCTTCATACGTGGGTCATAGTTGGCAAAGTAC 5998 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 5163 TCAACCACGACATAATGCAGGCCTTCACGCTTCATTCGTGGGTCATAGTTGGCAAAGTAC 5222 Query 5999 CAGGCATCTTTTCGTGTCACCCACATGCTGTACTGCACCTGGGCCATGTAAGCCGACTTT 6058 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5223 CAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCACCTGGGCCATGTAAGCCGACTTT 5282 Query 6059 ATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTAAACGGGCATTTC 6118 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 5283 ATGGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTAAACGGGCATTTC 5342 Query 6119 AGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGGGAGAGCAGGCGGTACGCATACTT 6178 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5343 AGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAGAGCAGGCGGTGCGCATACTT 5402 Query 6179 TCGTCGCGATAGATGATCGGGGATTCAATAACATTCACGCCGGAAGTGAACTCAAACAGG 6238 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 5403 TCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGCCGGAAGTAAACTCAAACAGG 5462 Query 6239 GTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCAGTGCTTTAGCGGGGATTTCCGGA 6298 | |||||||||||||||||||||||||||||||||||| || ||||| | ||||||| Sbjct 5463 GCTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCAGCGCCTTAGCATTAACTTCCGGA 5522 Query 6299 GCCACACCGGTGCAAACCTCGGCAAGCAGGGTGTGGAAGTAGGACATTTTCATGTCAGGC 6358 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 5523 GCCACACCGGTGCAAACCTCAGCCAGCAGGGTGTGGAAGTAGGACATTTTCATGTCAGGC 5582 Query 6359 CACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGTGAACTTCTGAAGCGGTGATGACG 6418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5583 CACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGTGAACTTCTGAAGCGGTGATGACG 5642 Query 6419 CCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTTCGACAGCTCTCACGTCGATTCCG 6478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 5643 CCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTTCGACAGCTCTCACGTCGATCCCG 5702 Query 6479 GTACGCTGCAGGATAATGTCCGGTGTCATGCAGCCACCTTCTGCTCAGAGGCTTTCTGTT 6538 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 5703 GTACGCTGCAGGATAATGTCCGGTGTCATGCTGCCACCTTCTGCTCAGTGGCTTTCTGTT 5762 Query 6539 TCAGGAATCCAAGAACTTTCACTGCTTCGGCCTGTGTCAGTTCTGACGATGCGCGAATGT 6598 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5763 TCAGGAATCCAAGAGCTTTCACTGCTTCGGCCTGTGTCAGTTCTGACGATGCGCGAATGT 5822 Query 6599 CGCGGCGAAATATCTGGGAACAGAGCGGCAATAAGTCGTCATCCCATGTTTTATCCAGGG 6658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5823 CGCGGCGAAATATCTGGGAACAGAGCGGCAATAAGTCGTCATCCCATGTTTTATCCAGGG 5882 Query 6659 CGATCAGCAGAGTGTTAATCTCCTGCATGGTTTCATCGTTAACCGGAGTGATGTCGCGTT 6718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5883 CGATCAGCAGAGTGTTAATCTCCTGCATGGTTTCATCGTTAACCGGAGTGATGTCGCGTT 5942 Query 6719 CCGGCTGGCGTTCTGCAGTGTATGCAGTATTTTCGACAATGCGCTCGGCTTCATCCTTGT 6778 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5943 CCGGCTGACGTTCTGCAGTGTATGCGGTATTTTCGACAATGCGCTCGGCTTCATCCTTGT 6002 Query 6779 CATAGATACCAGCAAATCCGAAGGCCAGACGGGCACACTGAATCATGGCTTTATGCCGTA 6838 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 6003 CATAGATACCAGCAAATCCGAAGGCCAGACGGGCACACTGAATCATGGCTTTATGACGTA 6062 Query 6839 ACATCCGTTTGGGATGCGACTGCCACGGGCCGGTGATTTCTCTGCCTTCGCGGGTTTTGA 6898 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 6063 ACATCCGTTTGGGATGCGACTGCCACGGTCCGGTGATTTCTCTGCCTTCGCGGGTTTTGA 6122 Query 6899 ATGGTTCGCGGCGGCATTCATCCATCCACTCGGTAACGCAGATCGGATGATTACGGTCTT 6958 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 6123 ATGGTTCGCGGCGGCATTCATCCATCCACTCGGTAACGCAGATCGGATGATTGCGGTCCT 6182 Query 6959 TGCGGTAAATCCGGCATGTACAGGATTCATTGTCCTGCTCAAAGTCCATGCCATCAAACT 7018 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 6183 TGCGGTAAATCCGGCATGTGCAGGATTCATTGTCCTGCTCAAAGTCCATACCATCAAACT 6242 Query 7019 GCTGGTTTTCATTGATGATGCGGGACCAGCCATCAACGCCCACCACCGGAACGATGCCGT 7078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6243 GCTGGTTTTCATTGATGATGCGGGACCAGCCATCAACGCCCACCACCGGAACGATGCCGT 6302 Query 7079 TCTGCTTATCAGGGAAGGCGTAAATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGG 7138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6303 TCTGCTTATCAGGGAAGGCGTAAATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGG 6362 Query 7139 CGACGATCAACAATGCGATGAACTGCGCATCGCTGGCATCACCTTTAAATGCCGTCTGGC 7198 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 6363 CGACGATCAGCAATGCGATGAACTGCGCATCGCTGGCATCGCCTTTAAATGCCGTCTGGC 6422 Query 7199 GAAGAGTGGTGATCAGTTCCTGTGGGTCGACAGAATCCATGCCGACACGTTCAGCCAGCT 7258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6423 GAAGAGTGGTGATCAGTTCCTGTGGGTCGACAGAATCCATGCCGACACGTTCAGCCAGCT 6482 Query 7259 TCCCTGCCAGCGTTGCGAGTGCTGTACTCATCCGCTTTATACCTCTGAATCGATATCAAC 7318 |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 6483 TCCCAGCCAGCGTTGCGAGTGCTGTACTCATCCGTTTTATACCTCTGAATCAATATCAAC 6542 Query 7319 CTGGTGGTGAGCAATGGTTTCAACCATGTACCGGGTGTGTTCTGCCATGCGCTCCTGAAA 7378 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6543 CTGATGGTGAGCAATGGTTTCAACCATGTACCGGATGTGTTCTGCCATGCGCTCCTGAAA 6602 Query 7379 CTCAACATCGTCATCAAACGCACGGGTAATGGCTTTTTTGCTGGCCCCGTGGCGTTGCAA 7438 |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct 6603 CTCAACATCGTCATCAAATGCACGGGTAATGGCTTTTTTGCTGGCCCCGCAGCGTTGTAA 6662 Query 7439 ATGATCGATGCAGAGTGATTCAAACAGGTGCTGGGGCAGACCTTTTCCCATGTCGTCTGC 7498 ||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||| Sbjct 6663 ATGATCGATGCAGAGCGATTCAAACAAATGCTGGGGCAGGCCTTTGTCCATGTCGTCTGC 6722 Query 7499 CAGTTCTGCCTCTTTCTCTTCACGGGCGATCTGCTGGTAGTGACGCGTCCAGCTCTGAGC 7558 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 6723 CAGTTCTGCCTCTTTCTCTTCACGGGCGATCTGCTGGTAGTGACGCGCCCAGCTCTGAGC 6782 Query 7559 CTCAAGACGATCCTGAATGTAATAAGCGTTCATGGCTGAACTCCTG-AAATAGCTGTGAA 7617 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 6783 CTCAAGACGATCCTGAATGTAATAAGCGTTCATGGCTGAACTCCTGAAAATGGCTGTGAA 6842 Query 7618 AATATCGCCCGCGAAATGCCGGGCTGATTAGGAAAACAGGAAA-GGGGGTTAGTGA 7672 |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct 6843 AATATCGCCCGCGAAATGCCAGGCTGATTAGGAAAACAAGAAAGGGGGGTTAGTGA 6898 Score = 136 bits (150), Expect = 2e-27 Identities = 110/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 59508 TCACTTCACACCTCTCTGTTTGTTGATAAGTTCAATATCCTGCTGGCAACTGGCGCAAGC 59567 ||||||| |||||||||||| ||||||| || | ||| |||||||||||||| |||| Sbjct 4096 TCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCTTGCTGGCAACTGGCACAAGT 4155 Query 59568 TCTGCATCCACGAACAGCCAGGCGTCGCCGCTCATCTATCGGATCGCCACACTCGCAACA 59627 | || || |||| ||||| |||| || ||||||||||||||||||||||| ||||| Sbjct 4156 CCGACAACCCTGAACGGCCAGTCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACA 4215 Query 59628 ATGAGTAGCAGAT 59640 |||||| |||||| Sbjct 4216 ATGAGTGGCAGAT 4228 Score = 122 bits (134), Expect = 3e-23 Identities = 67/67 (100%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1696 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATATTGGT 1755 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2858 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATATTGGT 2917 Query 1756 TACGTCT 1762 ||||||| Sbjct 2918 TACGTCT 2924 Score = 114 bits (126), Expect = 5e-21 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 2063 ATCATCTCCATAAAACAAAACTCGCCGTAGCGAGTTCAGATAAAAGAAATCCCCGCGAAT 2122 ||||||||||||||||||||| |||||||||||||||||||||||||||||| || | | Sbjct 3043 ATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCTCGTCAGT 3102 Query 2123 GCGAGGATTGTTATTCATTGCCGATATTCACCTTT 2157 ||||||| || | |||||||| | ||| ||| ||| Sbjct 3103 GCGAGGA-TGCTGTTCATTGCTGCTATACACTTTT 3136 >seq1687 Length=800 Score = 248 bits (274), Expect = 3e-61 Identities = 214/263 (81%), Gaps = 3/263 (1%) Strand=Plus/Plus Query 27114 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 27173 || ||||||||||| ||||| | ||||||||||| |||||||| ||||| |||||||| Sbjct 541 AATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAA 600 Query 27174 CTGGAACAGGCGAATGCCACCATTACTGACATGCAGGTGCGCCAGCGTGATGTTGCTGCG 27233 ||| | | |||||| || | ||||||||||||||| |||||||||||||||||||||| Sbjct 601 CTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGCCAGCGTGATGTTGCTGCA 660 Query 27234 CTCGATGCAAAATACTCGAGGGAGTTAGCCGATGCGAGAGCTGAAAATGAAACTCTGCGT 27293 || |||| ||||||| ||| ||||||||| |||||| |||||||||||| |||||||| Sbjct 661 CTGGATGAAAAATACACGAAGGAGTTAGCTAATGCGAAAGCTGAAAATGATGCTCTGCGT 720 Query 27294 GCTGATGTTGCCGCTGGTCGTAAGCGCCTGCGGATCAACGCCACCTGCTCCGGTACCGTG 27353 | || |||||||||||||||| || ||| ||||| || ||| || | | ||| Sbjct 721 GATGGTGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTG-TCAG--TCAGTG 777 Query 27354 CGTGAAGCCACCGGCACCTCCGG 27376 |||||||||||| | ||||||| Sbjct 778 CGTGAAGCCACCACCGCCTCCGG 800 >seq9861 Length=642 Score = 152 bits (168), Expect = 2e-32 Identities = 181/246 (74%), Gaps = 21/246 (9%) Strand=Plus/Minus Query 57593 CCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCT 57652 ||| ||||| | |||| | |||||||||||||||||||| | ||||||||| ||||||| Sbjct 261 CCGCCACTACGGCGGTGATACAGATGACGATCAGGGCGACAATCATCGCCTTATGCTGCT 202 Query 57653 TCATAGCCTGCTTCTCCTTG-CCTTTCGGCACGTAAGAGGCTAACCTACATGTGTTCAGC 57711 |||| || |||||||||| |||| ||| ||||||||| | |||||||||||| || Sbjct 201 TCATTGCTCTCTTCTCCTTGACCTTACGGTCAGTAAGAGGC-ACTCTACATGTGTTCTGC 143 Query 57712 ATGGATTGAGCCTCAGATTAATGTTAAGCGTCTTGCCGGACGCGTAATGTTAACTGGGGC 57771 || | | ||||| | || || ||| ||| | | ||||| Sbjct 142 ATATAGGGGGCCTCGGGTTGATAGTAA------------------AATATCACTCGGGGC 101 Query 57772 TTTTCTCTATCTGCCGTTGGTGTTCATGCCCGAGGCAGATAGCCTCAAGCACCCGCAGCA 57831 |||||||||||||||||| | | ||||| ||| ||||||||||||||||||||| || Sbjct 100 TTTTCTCTATCTGCCGTT-CAGCTAATGCCTGAGACAGATAGCCTCAAGCACCCGCCGCT 42 Query 57832 ATTCTA 57837 ||| || Sbjct 41 ATTATA 36 >seq3840 Length=990 Score = 141 bits (156), Expect = 4e-29 Identities = 144/180 (80%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 27523 TGCGCCGTATCGTCACCGTATTCCTGCATTAACAGAGACCGCAGCCAGACAGGGAGACTC 27582 ||||| |||||||| ||||||||| |||||||| ||||| |||| ||| |||| | || Sbjct 607 TGCGCTGTATCGTCGCCGTATTCCCGCATTAACCATGACCGTAGCCCGACGGGGA-ATTC 665 Query 27583 CT-CTGCGAGAGTGTGCGGGGATAATCAAAAACGATACACACCGGGTTTTCTCATTTTTC 27641 || ||||| ||||||||||| ||||||||||||||| ||||||||||||| | | | Sbjct 666 CTTCTGCGTGAGTGTGCGGGAATAATCAAAAACGATGCACACCGGGTTTT-ACTGTGCTG 724 Query 27642 ACGAGATGGGAGCGATTTCCCGCGAAGCCGCCTGTCCGGTGCGGTGGTGGAAGAAACCGG 27701 || ||| | || | || ||| | || ||| | ||||||||| |||||||||||||||| Sbjct 725 AC-AGA-CGCAG-GGTTACCCTCATAGTCGCTTTTCCGGTGCGATGGTGGAAGAAACCGG 781 >seq501 Length=12468 Score = 111 bits (122), Expect = 6e-20 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 20595 TTATTATCCTGCGCC-CGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCC 20653 |||| |||| |||| |||||| ||||||||||||| ||||| ||||||||||||||| Sbjct 4764 TTATAATCCCTCGCCACGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCT 4823 Query 20654 AGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATAT 20689 |||||||||||||| ||||||| ||||||||| || Sbjct 4824 TGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAAAT 4859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194827472786096