Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1043 136 4e-27 >seq1043 Length=1979 Score = 136 bits (150), Expect = 4e-27 Identities = 302/445 (68%), Gaps = 11/445 (2%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| || ||| || || ||||| || || |||||||| | ||||| || ||||| || | Sbjct 208 ACAGCAAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGA 267 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | ||| ||| |||| || || ||||| | |||||| |||| | ||| ||| Sbjct 268 ACGACAAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGAGCAGAAACTGCCAC 327 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACG-TCGCGTCT 17134 |||||| ||||||||||| | ||||| |||| || || |||||| | | || | | Sbjct 328 TAAAGAAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCGT 387 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 | || ||||| | |||| |||||||| | ||| | | || || || Sbjct 388 TGGT----GATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCG 443 Query 17195 ATGGCCTTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252 ||||| | || | || | |||| ||| | | || | || || || |||||||| | Sbjct 444 ATGGCGTGGAAGAGCATGT-TCTTCTTCTCGGTGTTC-TTGATGTAGGTGTCGATGAGAA 501 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 | ||||| | || ||||| |||||||| ||||| || || ||||| || || || || | Sbjct 502 GACTGTAGGTCTCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTG 561 Query 17313 CTTCCGCTATTTGAACTTC-CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371 | || | || || || || || | ||| ||| || ||||| ||||| || |||||| Sbjct 562 CCTCTGGGATCTGCACCTCAGACAT-GAAGCGTGTGGCAAGATTCTCGTTGACAATGCCG 620 Query 17372 TCGCTCGCGGCGAAAAACGCCAATA 17396 || ||||| || || |||| || Sbjct 621 TCCGATGCGGCAAAGAAGGCCAGTA 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517362990504360