Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6863 102 1e-16 seq8653 87.8 3e-12 >seq6863 Length=4430 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 124638 GAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGT 124697 |||||||| |||| ||||||||||| || || ||||| |||||||| | |||||| | Sbjct 1452 GAAGGTATCCCACAGGATCAACAAAGACTGATCTTTGCTGGAAAACAGCTGGAGGATGAT 1393 Query 124698 CGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTA 124757 || ||| | || ||||| || || || || | ||| ||| | ||| ||||| ||||||| Sbjct 1392 CGCACAATGGACGATTACAACATCCAGAAGGGATCGACTCTTCATCTGGTTCTACGTTTG 1333 Query 124758 CGAGGTGGTAT 124768 ||||||| || Sbjct 1332 AGAGGTGGCAT 1322 >seq8653 Length=1535 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| |||||||| | || || || || || || ||||| | || | Sbjct 421 AATGCAAATCTTTGTAAAGACATTGACTGGAAAGACCATCACACTAGAGGTCGAGGGCTC 362 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || || | || || |||||||| ||||||||||| ||||| ||||| Sbjct 361 TGACACTATCGAGAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATCCCACCCGATCA 302 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || || ||| | || || |||| || | | || || || Sbjct 301 ACAACGTTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACTCTCGGCGACTACAA 242 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | || ||||| | ||| | || || || || Sbjct 241 CATTCAGAAGGAGTCTACCCTCCACTTGGTGCTGCGTCTCCGTGGAGGAAT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755189446793600