Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq19 170 2e-37 >seq19 Length=770976 Score = 170 bits (188), Expect = 2e-37 Identities = 574/883 (65%), Gaps = 18/883 (2%) Strand=Plus/Minus Query 13911 TTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATAT 13970 |||||||||| |||| || | ||| |||||||| || ||||| |||| ||| || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 13971 TTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAAT 14029 | |||||||||||||| ||||| || | ||| | | | ||| | |||| ||||| Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGG-CATGATATATTTTGGTATAACCCAGTTCCTGC 360735 Query 14030 AGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 14089 || |||| || |||| ||||||||||| || ||||| | | |||||| || || Sbjct 360734 AGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 360675 Query 14090 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 14149 || || || | || || | |||||| ||||| || || || ||| ||| Sbjct 360674 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 360615 Query 14150 ATAATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACG 14207 || || | ||| | | || |||||| || |||| ||| | || | Sbjct 360614 ATTCCATGAACGACTTCCT--GGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGG 360557 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 |||| |||||||| | ||||||||||| ||| | || || ||| |||| |||| Sbjct 360556 CAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTG 360497 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 |||||| |||| |||||| ||||| || || | | ||| ||| ||||| || | Sbjct 360496 GCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATGC 360437 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14387 | || ||||| || || || | || ||||| |||| ||| | | |||| Sbjct 360436 CTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAA------ATTTCCGCCCTCAATCC 360383 Query 14388 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447 | |||||||| | |||||| || | | || | || || | |||| || | Sbjct 360382 AGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACA 360323 Query 14448 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14507 || || |||| || | | ||| || ||||| || || | ||| |||||| Sbjct 360322 GCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAG 360263 Query 14508 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14567 |||| ||||||||||| ||||| || ||||||||||| | ||||| | |||| Sbjct 360262 AGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTA 360203 Query 14568 C--CTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14625 | | || | | || | | | || | |||||||| || || || ||||| || ||||| Sbjct 360202 CTTCGCTCA-TGAAGT-TCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAA 360145 Query 14626 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAAT-CGG 14684 ||| || | ||| | ||| || | |||| | | | | || | ||| | | Sbjct 360144 AAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTT 360085 Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744 || || | |||||| || | ||| ||| | ||||| ||||| || || || |||| Sbjct 360084 CT-GGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTAT 360026 Query 14745 ACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 ||||| |||| ||||| ||| ||||| |||| ||||| Sbjct 360025 ACATTTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482175410384360