Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq19 311 1e-79 seq3533 221 2e-52 seq1043 192 8e-44 >seq19 Length=770976 Score = 311 bits (344), Expect = 1e-79 Identities = 1030/1586 (65%), Gaps = 38/1586 (2%) Strand=Plus/Minus Query 79355 CGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATG 79414 || ||||||| ||||| ||||| | ||||| | | || ||| || || ||||||| Sbjct 362633 CGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCAAATG 362574 Query 79415 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 79474 | || | || ||||| || ||||| ||||| || ||||| | ||| | ||||| | Sbjct 362573 GTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGTCTGT 362514 Query 79475 GTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 | | | | || ||| ||| |||||| | |||||||||||| ||| |||||||||| Sbjct 362513 GGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATTTTAT 362454 Query 79535 TGAGATTCCTGA----CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGT 79590 | || ||| | || || || ||||| | || ||| || |||||| | Sbjct 362453 TCAGGTTCAGGGTAGCCTGATAGGTT----ACATCATATAATTTCTGATGATCAAACTCT 362398 Query 79591 CCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT-- 79648 || | || ||||| | ||| || | || ||||| ||||| || || ||||| | Sbjct 362397 CCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGTCT 362338 Query 79649 TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAAT 79708 | | | | ||| | ||| ||||| || || ||||| || || ||||||||||||| Sbjct 362337 TTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAAT 362280 Query 79709 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTT 79768 |||| || || || |||| ||||| ||||| | | | || || || |||| Sbjct 362279 TTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTTT 362220 Query 79769 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG-ACTTGTAT 79827 ||||||| || || | ||| || ||| | || | || || || | || | | Sbjct 362219 CAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGCTTTAATGGTTTTACGGGCAC 362160 Query 79828 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887 || || || ||||||| | |||||| ||||| || | || | ||| | Sbjct 362159 GTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCAAAGCAATCTGCC 362101 Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTC 79947 | ||| || ||| | |||||| | || ||| ||||| | || | ||| | | || Sbjct 362100 AGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCCTTCTC 362041 Query 79948 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTT 80006 || || || ||| | |||||| || ||| |||| |||||||| | | | || || || Sbjct 362040 ATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTCTTCTTT 361982 Query 80007 TCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 80063 || || |||||| || || || || || | ||| | |||||| || |||| Sbjct 361981 ACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGCTCCAG 361925 Query 80064 GTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 80123 ||| ||||| | | | || ||||| ||| ||||| || | || | ||||| | Sbjct 361924 GTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCGGTATC 361865 Query 80124 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 80183 ||| | ||| ||||||| || | ||| |||||| || || || || || ||||| Sbjct 361864 GTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCAATATA 361805 Query 80184 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 80243 ||| ||||||| || ||| || || ||| || || ||||| ||| || || Sbjct 361804 AGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGTGAAAT 361745 Query 80244 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAG 80303 | ||| | ||||||| ||||| || || || || || || || || |||| | || Sbjct 361744 TTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATGGTCAG 361685 Query 80304 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363 || ||| ||| ||||||||| | | || | ||||||||||| || || | || Sbjct 361684 TAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGGGTTGC 361625 Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423 ||||||||||| ||| || || || ||||| |||| || ||| ||||| Sbjct 361624 ATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATATCTTC 361565 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 || ||||| ||||| || |||||||| |||| || || || | ||| || || |||| Sbjct 361564 TTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT-TTGTC 361506 Query 80484 ATT-TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 80542 || |||||||| || || |||||||| | |||||||| |||||||| | | || || Sbjct 361505 CTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAATCCAA 361446 Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT---CCTTATATTTGTTAAC--TAC 80597 | || | || |||||||| || || | | | || | |||| | || | Sbjct 361445 AATCCCTGTCATAAATAATGGTGCTGTCCAGAATCTCTGCATTTTCTTTGATCACCTCCC 361386 Query 80598 ATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 80657 | ||| || || ||| | | || | ||| | |||| | || |||||||| Sbjct 361385 AAACATCGT-----CTGCAATCAGTGAAGCAGATTTGTCTGTTTTGGAATCCACATAGTT 361331 Query 80658 GAATAAATC--CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 ||| | | |||||| || || ||| | || | |||||| ||||| ||| Sbjct 361330 --ATACAGCATCTCCATGGTTTTGGAGAAAGATTTCGTGGTGTTCTTGTGCAGATTAGAT 361273 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 80775 || || || | || || || | |||||||| ||||| | || || | ||||| Sbjct 361272 ACCGCAATACGGGAAGCCAATAATGCATAATCAGGATGCTTGGTGGTCAGCGAAGCTGCC 361213 Query 80776 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 80835 |||| || ||||| | |||| |||| || ||||| |||| || | |||| || Sbjct 361212 GTTTCCGCAGCCAGGTTATCCAGTTCTGAGGTGGTTACCCCATCGTACAAACCTTCAATT 361153 Query 80836 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 80895 ||||| | || | | ||| ||||| | | || | || |||||||| || | ||| Sbjct 361152 ACCTTTTTCGCCACATCAATCGGATCCACCAGTTCTGCATTAAAGCCATAGCAGAGCTTT 361093 Query 80896 CTAATACGAGACGTGATTTTATCAAA 80921 |||||| | || |||||||| || Sbjct 361092 TCAATACGGGCGGTTATTTTATCGAA 361067 Score = 248 bits (274), Expect = 1e-60 Identities = 583/876 (67%), Gaps = 7/876 (1%) Strand=Plus/Minus Query 49667 ttttttGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 49726 ||||||| || |||||||||||||| || || ||||| ||||| |||| || || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 49727 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 49786 | ||||| ||||||||||||||||| ||| ||| ||||| || | |||| ||| | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 49787 TCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 49846 | |||| || || ||||| || ||||| | ||||| || |||||| || || | Sbjct 360733 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 360674 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 | ||| || | || | |||| |||||| | ||| || |||||| || |||| Sbjct 360673 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 360614 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | |||| ||| | ||| || || | |||| | | || || || | Sbjct 360613 TTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGCAA 360554 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || || |||| ||||| ||||| ||| | || || ||| || || || |||| Sbjct 360553 ATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGGCA 360494 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | ||||| | ||||| | ||| || || || || ||| ||||| || |||| Sbjct 360493 TCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATGCCTT 360434 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTT 50146 | |||||||| || || || | | || || || | ||| ||| ||||| Sbjct 360433 CCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAGCGCA 360377 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 ||||| || || || || ||||||||||| | ||| |||| ||||| || || || Sbjct 360376 ATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCCTGT 360317 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 |||||| | | |||||||| ||| |||||||||| || ||| |||| || || | Sbjct 360316 CTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGGA 360257 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||||||| || ||||| || || || ||||| | || |||| || ||| ||||| | Sbjct 360256 TGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACTTC-G 360198 Query 50327 TACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 || | ||||| || | |||||||| || || |||||||| || |||||||| || Sbjct 360197 CTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAAAGC 360139 Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC 50444 | || ||| || ||||| ||| | ||| || | ||| | || || Sbjct 360138 AAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGTC 360079 Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504 | ||| | || | |||||| | ||||| || ||| || ||| |||||||| | Sbjct 360078 ATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACATTTC 360019 Query 50505 CCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||||| ||| | |||| || || |||| |||||| Sbjct 360018 CCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 >seq3533 Length=1137 Score = 221 bits (244), Expect = 2e-52 Identities = 421/609 (69%), Gaps = 17/609 (3%) Strand=Plus/Minus Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| || || || || |||||||| ||||||||||| | ||| || || ||||| Sbjct 967 TTTATACAGCATGCAAGCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTT 908 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--- 50063 |||||| || || || ||||||| || | || || | ||| | |||| | |||| Sbjct 907 GGAAAAGGTAAGGCCTGGCATTAAACCCCTTTTCTTCAACCAGTAGATGG-CACAAAAGC 849 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--AT-A 50120 || | | ||| |||||| || || || || ||||| || || | | || | || | Sbjct 848 TGCCGCTGAA--GAAGATACCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAATGA 791 Query 50121 ACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 || | | || || ||||| | ||||| || |||||||| ||||| || || Sbjct 790 ACAAGAGTTGG--TG-ATCCAGCGCAGCGCCCACTCTGCCTTCTTCTTTACGGCGGGGAT 734 Query 50181 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGAT 50240 ||| ||||| || || || || | | ||| | | ||| |||||| || || ||||| Sbjct 733 CGTCTCTATCGCGTTGAAAAGCTCCTGTTTCTTTGTGCTACTTTTAACGTATGTGTCGAT 674 Query 50241 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 50300 ||||||||| || | || | |||||||| ||||| || |||||||| || ||||| || Sbjct 673 CAAAAGACTGTAGGTCTCTGCGTGAATGTTCTCAATCGCGATCTGAAAGCCATAGAAGCA 614 Query 50301 TCTAGCCTCGGTAATCTGCACTTCTGTACA-AAATCGTTCAGCTAAATTTTCATTCACTA 50359 | ||||| | || || || || | ||| ||||| || | ||| ||||| || | Sbjct 613 GCGGGCCTCTGGTATTTGTACCTCAG-ACATGAATCGAGTGGCGAGATTCTCATTGACGA 555 Query 50360 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTG 50419 | ||||| || ||||| || |||| |||| | ||||| ||| ||||||| Sbjct 554 TACCGTCTGATGCGGCAAAGAATGCCAGCACATTGGTGATAAAGTGTCGTTCGTTGTCAT 495 Query 50420 TTAGTTTATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 50476 | || || || |||||| || ||||| || | |||| ||| || ||||||| | Sbjct 494 TGAGCTTGTTCTCCCAATCGTTCATATCAGAAGCCAAGTCTAATTCCTCTGCTGTCCAGA 435 Query 50477 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 50536 |||| || ||||| || || ||||||| ||| ||||| || || ||| ||||| | || Sbjct 434 ATGAAGCTTCTGCTTTCTTGTACATATCCCATATGTCTGTATGTTTGATAGGGAAGAGAA 375 Query 50537 CAAATCTAT 50545 | ||||||| Sbjct 374 CGAATCTAT 366 >seq1043 Length=1979 Score = 192 bits (212), Expect = 8e-44 Identities = 407/597 (68%), Gaps = 13/597 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| |||||| || || |||||||||| ||||||||| | ||| || || ||||| || | Sbjct 208 ACAGCAAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGA 267 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 ||| | ||| |||||| || ||||| || |||||||| || || ||| || ||| Sbjct 268 ACGACAAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGA-GCAGAAACTGCCA 326 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTG-GCG 50127 ||||||||| || || || ||||||||||| || | | ||| | || | | ||| Sbjct 327 CTAAAGAAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCG 386 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 || || ||||| ||||| ||||| ||||| || || || || || || Sbjct 387 TTGG--TG-ATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCG 443 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| | ||||| ||| || | | | | || | || || ||||| | |||| Sbjct 444 ATGGCGTGGAAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAAGA 503 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || || | || || || ||||| || ||||| || || ||||| |||||||| | ||| Sbjct 504 CTGTAGGTCTCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTGCC 563 Query 50308 TCGGTAATCTGCACTTCTGTACAA-AATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 || | |||||||| || | ||| || ||| || | ||| || || || || ||||| Sbjct 564 TCTGGGATCTGCACCTCAG-ACATGAAGCGTGTGGCAAGATTCTCGTTGACAATGCCGTC 622 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTT 50426 || ||||| || |||| ||| || | ||||| || ||||| | || || Sbjct 623 CGATGCGGCAAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGTTCAGCTT 682 Query 50427 ATTC---CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 ||| ||||| | || || | | | ||| | ||||| ||||||| || ||||| Sbjct 683 GTTCTCCCAATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAAGATGC 742 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||||||||| || ||||| ||||| ||||| | | | ||| ||||| | ||||| Sbjct 743 CTCTGCCTTCTTGTACATGTTCCAAATGTCCGGGTGCTTGATAGGGAAGAGTACAAA 799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718015367832280